Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC9.21□□□□□ -0.93
COL15A1P39059 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 RPL12P1-201ENST00000374520 498 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
COL15A1P39059 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
COL15A1P39059 AC006509.1-201ENST00000420788 634 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 AP003385.1-201ENST00000426387 893 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 RPEP4-201ENST00000437636 602 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 RPL7L1P11-201ENST00000446092 721 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 AC096922.1-201ENST00000461635 651 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 RN7SKP233-201ENST00000517005 110 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC9.21□□□□□ -0.94
COL15A1P39059 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC9.21□□□□□ -0.94
COL15A1P39059 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC9.21□□□□□ -0.94
COL15A1P39059 OR4N3P-201ENST00000559395 818 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC9.21□□□□□ -0.94
COL15A1P39059 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 AC097381.3-201ENST00000608962 462 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC9.21□□□□□ -0.94
COL15A1P39059 AC135068.4-201ENST00000622949 925 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 ARHGAP42P4-201ENST00000549782 2934 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 PHF2P2-202ENST00000444553 2865 ntBASIC9.21□□□□□ -0.94
COL15A1P39059 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
COL15A1P39059 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
COL15A1P39059 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 LRRC2-AS1-201ENST00000599511 2291 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC9.2□□□□□ -0.94
COL15A1P39059 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
COL15A1P39059 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 RN7SKP55-201ENST00000364888 307 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC9.2□□□□□ -0.94
COL15A1P39059 MIR191-201ENST00000384873 92 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC9.2□□□□□ -0.94
COL15A1P39059 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 RPL24P2-201ENST00000421023 475 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 PTPN2P1-201ENST00000423212 1072 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 DCAF13P2-201ENST00000514188 555 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 CASC11-203ENST00000519071 791 ntTSL 3 BASIC9.2□□□□□ -0.94
COL15A1P39059 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC9.2□□□□□ -0.94
COL15A1P39059 AC107958.1-201ENST00000556576 290 ntBASIC9.2□□□□□ -0.94
COL15A1P39059 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
COL15A1P39059 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
COL15A1P39059 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 AC092999.1-201ENST00000624004 1924 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC9.19□□□□□ -0.94
COL15A1P39059 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
COL15A1P39059 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 AC051619.3-201ENST00000560646 2426 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
COL15A1P39059 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 RPL5P8-201ENST00000396820 815 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 SNORA11.3-201ENST00000408471 128 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
COL15A1P39059 IGKV1OR2-3-201ENST00000411475 288 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 SNRPEP5-201ENST00000425442 278 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC9.19□□□□□ -0.94
COL15A1P39059 RPL3P11-201ENST00000434028 1146 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC9.19□□□□□ -0.94
COL15A1P39059 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC9.19□□□□□ -0.94
COL15A1P39059 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC9.19□□□□□ -0.94
COL15A1P39059 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC9.19□□□□□ -0.94
COL15A1P39059 RN7SL502P-201ENST00000481857 290 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC9.19□□□□□ -0.94
COL15A1P39059 RPL5P33-201ENST00000487833 905 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 EEF1B2P1-201ENST00000567221 672 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC9.19□□□□□ -0.94
COL15A1P39059 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 AC139795.3-201ENST00000606358 541 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC9.19□□□□□ -0.94
COL15A1P39059 AL121809.2-201ENST00000613169 341 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms