Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL031846.1-201ENST00000560933 314 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 RN7SL178P-201ENST00000582930 304 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 MIR4470-201ENST00000583453 72 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 MIR6070-201ENST00000613967 103 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 AC098590.2-201ENST00000614787 281 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 AC005355.2-201ENST00000625064 484 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 AL356585.10-201ENST00000641883 123 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-DOAP06340 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-DOAP06340 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-DOAP06340 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HLA-DOAP06340 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.63□□□□□ -1.03
HLA-DOAP06340 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.63□□□□□ -1.03
HLA-DOAP06340 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 MAPK10-279ENST00000641157 2449 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 RNA5SP114-201ENST00000363780 113 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 RPSAP48-201ENST00000466509 889 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 RN7SL306P-201ENST00000492941 296 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 RNA5SP518-201ENST00000515957 119 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 RBMS2P1-201ENST00000525031 1226 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 MIR4800-201ENST00000537353 80 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 AC092032.1-201ENST00000603090 165 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 AC245407.2-201ENST00000614199 451 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 THAP12P7-201ENST00000520248 2290 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 AC004014.2-201ENST00000623718 5122 ntBASIC8.62□□□□□ -1.03
HLA-DOAP06340 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.62□□□□□ -1.03
HLA-DOAP06340 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HLA-DOAP06340 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC091544.5-201ENST00000620192 3815 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC126474.2-201ENST00000623268 1750 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 RN7SKP174-201ENST00000363803 330 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 RPL21P33-201ENST00000444831 484 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC009244.1-201ENST00000450566 258 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 PABPC1P10-201ENST00000464731 381 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 RN7SL180P-201ENST00000466769 294 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC022730.1-201ENST00000473114 568 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 BMS1P15-201ENST00000554269 1141 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 OR4N3P-201ENST00000559395 818 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 RN7SL426P-201ENST00000579106 295 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AL035422.2-201ENST00000603059 565 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 AL136985.2-201ENST00000607372 535 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC135068.4-201ENST00000622949 925 ntBASIC8.61□□□□□ -1.03
HLA-DOAP06340 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.61□□□□□ -1.03
HLA-DOAP06340 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HLA-DOAP06340 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms