Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 AL358913.2-201ENST00000553881 1548 ntBASIC7.82□□□□□ -1.16
LMO3Q8TAP4 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.82□□□□□ -1.16
LMO3Q8TAP4 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 Y_RNA.209-201ENST00000364156 111 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 RN7SKP107-201ENST00000364157 290 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 SNORA70.8-201ENST00000384231 136 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC004692.1-201ENST00000455430 424 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC008620.1-201ENST00000468453 592 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 RN7SL160P-201ENST00000468558 284 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 RN7SL775P-201ENST00000498361 336 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC024451.1-201ENST00000508013 779 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC027801.3-201ENST00000515049 698 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC090539.2-201ENST00000523425 671 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 HIGD1AP9-201ENST00000550710 279 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 PRR13P3-201ENST00000603578 376 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AC087893.2-201ENST00000623272 255 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 CASC19-212ENST00000641153 1287 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 AL359396.1-201ENST00000623151 2376 ntBASIC7.81□□□□□ -1.16
LMO3Q8TAP4 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
LMO3Q8TAP4 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 SPATA31C2-201ENST00000324915 3777 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AL138847.1-201ENST00000258651 546 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 FTH1P26-201ENST00000406512 701 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 OR13C1P-201ENST00000457612 963 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 RN7SL392P-201ENST00000473024 299 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AC008967.1-201ENST00000504843 163 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 EGLN3P1-201ENST00000541727 720 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 BMS1P8-201ENST00000565049 1178 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 AC113361.1-201ENST00000606683 543 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 MIR8089-201ENST00000620165 82 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.8□□□□□ -1.16
LMO3Q8TAP4 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LMO3Q8TAP4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms