Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC007000.1-201ENST00000453064 794 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 RN7SL241P-201ENST00000482973 236 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC7.05□□□□□ -1.28
SCN2BO60939 SNX18P27-201ENST00000523611 779 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.05□□□□□ -1.28
SCN2BO60939 AP006587.2-201ENST00000530696 493 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.05□□□□□ -1.28
SCN2BO60939 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.05□□□□□ -1.28
SCN2BO60939 AP000619.1-201ENST00000540293 1000 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 BMS1P15-201ENST00000554269 1141 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC7.05□□□□□ -1.28
SCN2BO60939 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.05□□□□□ -1.28
SCN2BO60939 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.05□□□□□ -1.28
SCN2BO60939 AC012100.3-201ENST00000624738 575 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 CASC19-212ENST00000641153 1287 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 MFSD8-234ENST00000641503 1082 ntBASIC7.05□□□□□ -1.28
SCN2BO60939 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.05□□□□□ -1.28
SCN2BO60939 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.05□□□□□ -1.28
SCN2BO60939 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SCN2BO60939 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
SCN2BO60939 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.05□□□□□ -1.28
SCN2BO60939 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.05□□□□□ -1.28
SCN2BO60939 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCN2BO60939 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCN2BO60939 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCN2BO60939 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SCN2BO60939 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.05□□□□□ -1.28
SCN2BO60939 SF3A3P1-201ENST00000446317 1477 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.04□□□□□ -1.28
SCN2BO60939 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 AC087045.3-201ENST00000623046 2468 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 EEF1A1P15-201ENST00000395772 1408 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 AC008171.1-201ENST00000395058 200 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.04□□□□□ -1.28
SCN2BO60939 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.04□□□□□ -1.28
SCN2BO60939 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.04□□□□□ -1.28
SCN2BO60939 VN1R6P-201ENST00000458417 907 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.04□□□□□ -1.28
SCN2BO60939 AC015820.1-201ENST00000473882 321 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 AC114300.1-201ENST00000502347 280 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 AC008677.3-201ENST00000519146 666 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 OR7E96P-201ENST00000530816 976 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.04□□□□□ -1.28
SCN2BO60939 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.04□□□□□ -1.28
SCN2BO60939 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.04□□□□□ -1.28
SCN2BO60939 AC006557.4-201ENST00000585516 830 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
SCN2BO60939 AL136985.2-201ENST00000607372 535 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 MIR6723-201ENST00000621981 89 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 AC133485.6-201ENST00000624045 688 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.04□□□□□ -1.28
SCN2BO60939 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.04□□□□□ -1.28
SCN2BO60939 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 CTAGE11P-201ENST00000451540 2353 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 MARK2P4-201ENST00000503381 2380 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 TRIM51FP-201ENST00000526452 1353 ntBASIC7.04□□□□□ -1.28
SCN2BO60939 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.04□□□□□ -1.28
SCN2BO60939 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SCN2BO60939 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 AL513523.1-201ENST00000417868 1309 ntBASIC7.03□□□□□ -1.28
SCN2BO60939 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SCN2BO60939 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SCN2BO60939 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.03□□□□□ -1.28
SCN2BO60939 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
SCN2BO60939 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SCN2BO60939 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 AP003471.1-202ENST00000319051 1988 ntBASIC7.03□□□□□ -1.28
SCN2BO60939 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SCN2BO60939 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms