Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 YBX1P2-201ENST00000489612 999 ntBASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
ARFGEF1Q9Y6D6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 AC116407.4-201ENST00000623319 1061 ntBASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.71■■□□□ 1.55
ARFGEF1Q9Y6D6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 HMGA1P5-201ENST00000412453 271 ntBASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 B3GAT3P1-201ENST00000471720 806 ntBASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 EGLN1P1-201ENST00000531623 762 ntBASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.7■■□□□ 1.55
ARFGEF1Q9Y6D6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
ARFGEF1Q9Y6D6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ARFGEF1Q9Y6D6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ARFGEF1Q9Y6D6 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.7■■□□□ 1.54
ARFGEF1Q9Y6D6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.7■■□□□ 1.54
ARFGEF1Q9Y6D6 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.7■■□□□ 1.54
ARFGEF1Q9Y6D6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ARFGEF1Q9Y6D6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 AC091390.4-202ENST00000476426 537 ntBASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ARFGEF1Q9Y6D6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 HCG4P8-203ENST00000443049 980 ntBASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 FAM87A-204ENST00000613235 858 ntBASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ARFGEF1Q9Y6D6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 SLC25A1P4-201ENST00000567977 778 ntBASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ARFGEF1Q9Y6D6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 INGX-201ENST00000359239 846 ntBASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.65■■□□□ 1.54
ARFGEF1Q9Y6D6 AC069148.1-201ENST00000608741 768 ntBASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms