Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 HLA-B-256ENST00000639848 1089 ntBASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI2Q9Y5P3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 LINC01521-201ENST00000504184 1943 ntBASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 AC023632.3-201ENST00000521633 145 ntBASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 AC060766.5-201ENST00000590539 871 ntBASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 AC092368.3-202ENST00000574180 1591 ntBASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 AL162377.1-201ENST00000618844 1793 ntBASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAI2Q9Y5P3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAI2Q9Y5P3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAI2Q9Y5P3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 MIR1224-201ENST00000408193 85 ntBASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 AC142381.4-202ENST00000563973 229 ntBASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 AL031963.3-201ENST00000606441 850 ntBASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAI2Q9Y5P3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms