Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 KRT18P68-201ENST00000392293 1000 ntBASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 AC092437.1-201ENST00000624794 1048 ntBASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA11Q9Y5H2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 AL137784.2-201ENST00000607332 1000 ntBASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 AC080038.1-201ENST00000611274 1154 ntBASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA11Q9Y5H2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 AC004911.1-201ENST00000416316 871 ntBASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 AL512625.2-201ENST00000417533 625 ntBASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 CYP2T3P-201ENST00000601990 817 ntBASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 AC005181.1-201ENST00000604782 1256 ntBASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA11Q9Y5H2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms