Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 AF213884.3-201ENST00000563833 479 ntBASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 AC053503.5-201ENST00000601508 636 ntBASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 AL136967.2-201ENST00000623968 743 ntBASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGB1Q9Y5G3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGB1Q9Y5G3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGB1Q9Y5G3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 AC105233.4-201ENST00000642045 216 ntBASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGB1Q9Y5G3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 EEF1DP3-203ENST00000566025 782 ntBASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 MIR4767-201ENST00000582827 78 ntBASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 MIR6821-201ENST00000617625 74 ntBASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGB1Q9Y5G3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGB1Q9Y5G3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 AL691432.2-201ENST00000607222 2038 ntBASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGB1Q9Y5G3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms