Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH1Q9Y2L9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 AC135050.7-201ENST00000624508 2218 ntBASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRCH1Q9Y2L9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 AL499627.2-201ENST00000606283 725 ntBASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.04■□□□□ 0.64
LRCH1Q9Y2L9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCH1Q9Y2L9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 AL136116.3-201ENST00000402907 1138 ntBASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.02■□□□□ 0.64
LRCH1Q9Y2L9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH1Q9Y2L9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH1Q9Y2L9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH1Q9Y2L9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
LRCH1Q9Y2L9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.02■□□□□ 0.63
LRCH1Q9Y2L9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRCH1Q9Y2L9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 AL512631.2-201ENST00000604634 923 ntBASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 AC009113.1-201ENST00000570267 2443 ntBASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH1Q9Y2L9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19■□□□□ 0.63
LRCH1Q9Y2L9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms