Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
COPS3Q9UNS2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 MIR638-201ENST00000385237 100 ntBASIC17.84■□□□□ 0.45
COPS3Q9UNS2 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.84■□□□□ 0.45
COPS3Q9UNS2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 KRT18P61-201ENST00000585825 1298 ntBASIC17.84■□□□□ 0.45
COPS3Q9UNS2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 FAM21FP-204ENST00000608637 956 ntBASIC17.84■□□□□ 0.45
COPS3Q9UNS2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPS3Q9UNS2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPS3Q9UNS2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 TMEM179-206ENST00000616017 1645 ntBASIC17.83■□□□□ 0.44
COPS3Q9UNS2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPS3Q9UNS2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms