Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPARGC1AQ9UBK2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.86■□□□□ 0.93
PPARGC1AQ9UBK2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 AC083880.1-201ENST00000608266 535 ntBASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 AC092720.2-201ENST00000602388 1665 ntBASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.85■□□□□ 0.93
PPARGC1AQ9UBK2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPARGC1AQ9UBK2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.83■□□□□ 0.93
PPARGC1AQ9UBK2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPARGC1AQ9UBK2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPARGC1AQ9UBK2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms