Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 SYT6-210ENST00000641643 1587 ntBASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD3Q9UBI1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD3Q9UBI1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 SLC47A1P1-202ENST00000449666 945 ntBASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 AP004607.4-201ENST00000530158 1459 ntBASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD3Q9UBI1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 AC009237.3-201ENST00000393279 1427 ntBASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms