Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.92■□□□□ 0.46
VSX1Q9NZR4 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.91■□□□□ 0.46
VSX1Q9NZR4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VSX1Q9NZR4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 BID-214ENST00000617586 542 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.9■□□□□ 0.46
VSX1Q9NZR4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.9■□□□□ 0.46
VSX1Q9NZR4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
VSX1Q9NZR4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
VSX1Q9NZR4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
VSX1Q9NZR4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.89■□□□□ 0.46
VSX1Q9NZR4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VSX1Q9NZR4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VSX1Q9NZR4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 AL162430.1-201ENST00000480705 870 ntBASIC17.89■□□□□ 0.45
VSX1Q9NZR4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 MIR5787-201ENST00000611784 55 ntBASIC17.89■□□□□ 0.45
VSX1Q9NZR4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX1Q9NZR4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 AL691432.2-201ENST00000607222 2038 ntBASIC17.88■□□□□ 0.45
VSX1Q9NZR4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 CYP2T1P-201ENST00000432607 1285 ntBASIC17.88■□□□□ 0.45
VSX1Q9NZR4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 AC231657.2-201ENST00000624556 255 ntBASIC17.88■□□□□ 0.45
VSX1Q9NZR4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSX1Q9NZR4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms