Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCKIPSDQ9NZQ3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCKIPSDQ9NZQ3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 AC091799.1-201ENST00000422823 811 ntBASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 AL391422.3-201ENST00000603791 2761 ntBASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NCKIPSDQ9NZQ3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 AL589743.5-201ENST00000616611 1050 ntBASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKIPSDQ9NZQ3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 AC026366.1-201ENST00000488803 879 ntBASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 UNC93B5-201ENST00000530315 699 ntBASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 AC006058.3-201ENST00000606217 1069 ntBASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKIPSDQ9NZQ3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 CYP2T3P-201ENST00000601990 817 ntBASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKIPSDQ9NZQ3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 AP003097.1-201ENST00000530657 1135 ntBASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms