Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.39■□□□□ 0.7
NDE1Q9NXR1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NDE1Q9NXR1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NDE1Q9NXR1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.39■□□□□ 0.7
NDE1Q9NXR1 HCG11-201ENST00000411553 5696 ntBASIC19.39■□□□□ 0.69
NDE1Q9NXR1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 AC061975.6-201ENST00000579045 1553 ntBASIC19.39■□□□□ 0.69
NDE1Q9NXR1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.39■□□□□ 0.69
NDE1Q9NXR1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDE1Q9NXR1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 BX842568.3-201ENST00000418104 571 ntBASIC19.37■□□□□ 0.69
NDE1Q9NXR1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.37■□□□□ 0.69
NDE1Q9NXR1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 AC093484.2-201ENST00000580996 2166 ntBASIC19.37■□□□□ 0.69
NDE1Q9NXR1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDE1Q9NXR1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDE1Q9NXR1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.35■□□□□ 0.69
NDE1Q9NXR1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms