Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AL162430.1-201ENST00000480705 870 ntBASIC18.68■□□□□ 0.58
RLIMQ9NVW2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AC013268.1-206ENST00000638368 961 ntBASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AC112229.1-201ENST00000639295 961 ntBASIC18.68■□□□□ 0.58
RLIMQ9NVW2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AL020996.1-203ENST00000536896 2307 ntBASIC18.68■□□□□ 0.58
RLIMQ9NVW2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RLIMQ9NVW2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 DPP3P2-201ENST00000416030 1696 ntBASIC18.66■□□□□ 0.58
RLIMQ9NVW2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 AC006015.1-201ENST00000429970 570 ntBASIC18.66■□□□□ 0.58
RLIMQ9NVW2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RLIMQ9NVW2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 DUX4L16-201ENST00000555130 1264 ntBASIC18.65■□□□□ 0.58
RLIMQ9NVW2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms