Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 AC104771.1-201ENST00000603335 964 ntBASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 AC061975.6-201ENST00000579045 1553 ntBASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2LQ9NUG4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 AL355802.2-201ENST00000402069 882 ntBASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 MIR2861-201ENST00000636310 90 ntBASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 TMEM191A-211ENST00000637163 1067 ntBASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2LQ9NUG4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 AC026185.1-201ENST00000445748 174 ntBASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 AL691432.2-201ENST00000607222 2038 ntBASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2LQ9NUG4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 TREX1-205ENST00000625293 1783 ntBASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 EEF1DP3-203ENST00000566025 782 ntBASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 AC053503.5-201ENST00000601508 636 ntBASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2LQ9NUG4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2LQ9NUG4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CCM2LQ9NUG4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.02■□□□□ 0.63
CCM2LQ9NUG4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2LQ9NUG4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.02■□□□□ 0.63
CCM2LQ9NUG4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms