Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 KRT18P68-201ENST00000392293 1000 ntBASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 AC105020.6-201ENST00000621523 1217 ntBASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 AC004911.1-201ENST00000416316 871 ntBASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 CYP2T3P-201ENST00000601990 817 ntBASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 IKBKGP1-201ENST00000612193 1073 ntBASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 OR10C1-204ENST00000622521 1039 ntBASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 AC092437.1-201ENST00000624794 1048 ntBASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZCCHC3Q9NUD5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 AC005181.1-201ENST00000604782 1256 ntBASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 BX119927.1-201ENST00000636596 1552 ntBASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZCCHC3Q9NUD5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
ZCCHC3Q9NUD5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.83■□□□□ 0.61
ZCCHC3Q9NUD5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC3Q9NUD5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC3Q9NUD5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZCCHC3Q9NUD5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 AL355472.2-201ENST00000422958 438 ntBASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 AC080038.1-201ENST00000611274 1154 ntBASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZCCHC3Q9NUD5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 AL137784.2-201ENST00000607332 1000 ntBASIC18.82■□□□□ 0.6
ZCCHC3Q9NUD5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms