Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 AC005181.1-201ENST00000604782 1256 ntBASIC18.62■□□□□ 0.57
POLE3Q9NRF9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLE3Q9NRF9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 AC133552.2-202ENST00000575694 574 ntBASIC18.61■□□□□ 0.57
POLE3Q9NRF9 AC080038.1-201ENST00000611274 1154 ntBASIC18.61■□□□□ 0.57
POLE3Q9NRF9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 AC092437.1-201ENST00000624794 1048 ntBASIC18.61■□□□□ 0.57
POLE3Q9NRF9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.61■□□□□ 0.57
POLE3Q9NRF9 TCF3P1-201ENST00000423021 1937 ntBASIC18.61■□□□□ 0.57
POLE3Q9NRF9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 BX119927.1-201ENST00000636596 1552 ntBASIC18.6■□□□□ 0.57
POLE3Q9NRF9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 AC010980.2-201ENST00000587099 1412 ntBASIC18.6■□□□□ 0.57
POLE3Q9NRF9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 AL589743.5-201ENST00000616611 1050 ntBASIC18.6■□□□□ 0.57
POLE3Q9NRF9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLE3Q9NRF9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 MIR935-201ENST00000401179 91 ntBASIC18.59■□□□□ 0.57
POLE3Q9NRF9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 AL137784.2-201ENST00000607332 1000 ntBASIC18.59■□□□□ 0.57
POLE3Q9NRF9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms