Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ELL3Q9HB65 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ELL3Q9HB65 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 AC116050.2-201ENST00000612102 1779 ntBASIC17.46■□□□□ 0.39
ELL3Q9HB65 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 SLC7A5P2-201ENST00000553010 536 ntBASIC17.46■□□□□ 0.39
ELL3Q9HB65 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 AC099778.1-201ENST00000568593 1911 ntBASIC17.46■□□□□ 0.39
ELL3Q9HB65 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ELL3Q9HB65 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.46■□□□□ 0.39
ELL3Q9HB65 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
ELL3Q9HB65 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ELL3Q9HB65 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ELL3Q9HB65 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 AL162377.1-201ENST00000618844 1793 ntBASIC17.44■□□□□ 0.38
ELL3Q9HB65 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 KRT19P1-201ENST00000405746 1186 ntBASIC17.44■□□□□ 0.38
ELL3Q9HB65 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.44■□□□□ 0.38
ELL3Q9HB65 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ELL3Q9HB65 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.43■□□□□ 0.38
ELL3Q9HB65 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.43■□□□□ 0.38
ELL3Q9HB65 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ELL3Q9HB65 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ELL3Q9HB65 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ELL3Q9HB65 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ELL3Q9HB65 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ELL3Q9HB65 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms