Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 AC243732.1-201ENST00000612648 864 ntBASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 RBM17P2-201ENST00000616397 1405 ntBASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 SUDS3P1-201ENST00000505831 966 ntBASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 CCDC92B-201ENST00000575506 885 ntBASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDC42EP4Q9H3Q1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 Z82202.1-201ENST00000623446 1880 ntBASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDC42EP4Q9H3Q1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42EP4Q9H3Q1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.39■□□□□ 0.86
CDC42EP4Q9H3Q1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.39■□□□□ 0.86
CDC42EP4Q9H3Q1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.39■□□□□ 0.86
CDC42EP4Q9H3Q1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42EP4Q9H3Q1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDC42EP4Q9H3Q1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42EP4Q9H3Q1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42EP4Q9H3Q1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms