Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC004870.1-201ENST00000315132 882 ntBASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 YBX1P2-201ENST00000489612 999 ntBASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 CR392000.1-201ENST00000624770 1228 ntBASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 AC116407.4-201ENST00000623319 1061 ntBASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3BQ96NU0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 FAM87A-204ENST00000613235 858 ntBASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 AC005332.1-201ENST00000577698 1310 ntBASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3BQ96NU0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 AC004264.1-201ENST00000608354 794 ntBASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3BQ96NU0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 AC007322.3-201ENST00000426526 701 ntBASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3BQ96NU0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 LINC00565-201ENST00000562710 2331 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms