Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GRAMD1AQ96CP6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
GRAMD1AQ96CP6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.52■□□□□ 0.87
GRAMD1AQ96CP6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GRAMD1AQ96CP6 AC098818.2-201ENST00000564925 2320 ntBASIC20.52■□□□□ 0.87
GRAMD1AQ96CP6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 AC116562.4-201ENST00000641316 2276 ntBASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 AC007322.4-201ENST00000509611 723 ntBASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.51■□□□□ 0.87
GRAMD1AQ96CP6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 FP700111.2-201ENST00000619190 1892 ntBASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
GRAMD1AQ96CP6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 TERF1P5-201ENST00000477545 1207 ntBASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 OR10C1-204ENST00000622521 1039 ntBASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
GRAMD1AQ96CP6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GRAMD1AQ96CP6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms