Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 ECEL1P2-202ENST00000465689 757 ntBASIC20.18■□□□□ 0.82
CLDN23Q96B33 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.18■□□□□ 0.82
CLDN23Q96B33 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN23Q96B33 AL445675.2-201ENST00000620291 557 ntBASIC20.18■□□□□ 0.82
CLDN23Q96B33 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN23Q96B33 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN23Q96B33 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN23Q96B33 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN23Q96B33 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN23Q96B33 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 BX664615.1-201ENST00000443558 458 ntBASIC20.17■□□□□ 0.82
CLDN23Q96B33 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 AC091076.1-201ENST00000610741 619 ntBASIC20.17■□□□□ 0.82
CLDN23Q96B33 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN23Q96B33 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN23Q96B33 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN23Q96B33 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN23Q96B33 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 AC242852.2-201ENST00000615738 1807 ntBASIC20.16■□□□□ 0.82
CLDN23Q96B33 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLDN23Q96B33 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN23Q96B33 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN23Q96B33 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN23Q96B33 AC063952.2-201ENST00000498792 1227 ntBASIC20.16■□□□□ 0.82
CLDN23Q96B33 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN23Q96B33 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLDN23Q96B33 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN23Q96B33 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 AK4P3-201ENST00000418260 669 ntBASIC20.15■□□□□ 0.82
CLDN23Q96B33 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 UPK3BP1-201ENST00000428678 509 ntBASIC20.15■□□□□ 0.82
CLDN23Q96B33 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 AC022616.7-201ENST00000525383 220 ntBASIC20.15■□□□□ 0.82
CLDN23Q96B33 LINC01238-205ENST00000567549 1107 ntBASIC20.15■□□□□ 0.82
CLDN23Q96B33 C1QL1P1-201ENST00000568105 661 ntBASIC20.15■□□□□ 0.82
CLDN23Q96B33 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.15■□□□□ 0.82
CLDN23Q96B33 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN23Q96B33 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CLDN23Q96B33 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CLDN23Q96B33 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 B3GAT3P1-201ENST00000471720 806 ntBASIC20.14■□□□□ 0.81
CLDN23Q96B33 AC128688.1-201ENST00000487626 519 ntBASIC20.14■□□□□ 0.81
CLDN23Q96B33 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 AL358472.4-201ENST00000633140 710 ntBASIC20.14■□□□□ 0.81
CLDN23Q96B33 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN23Q96B33 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN23Q96B33 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms