Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP61Q8NHU2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 AC121338.2-201ENST00000622535 1744 ntBASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 DUX4L16-201ENST00000555130 1264 ntBASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP61Q8NHU2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 AC006128.1-201ENST00000624704 1661 ntBASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 AC243732.1-201ENST00000612648 864 ntBASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP61Q8NHU2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 AC091799.1-201ENST00000422823 811 ntBASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 PLK5-205ENST00000642079 1969 ntBASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP61Q8NHU2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 AC013268.1-206ENST00000638368 961 ntBASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 AC112229.1-201ENST00000639295 961 ntBASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP61Q8NHU2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CFAP61Q8NHU2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.2■□□□□ 0.82
CFAP61Q8NHU2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP61Q8NHU2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP61Q8NHU2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP61Q8NHU2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms