Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 AC020763.4-201ENST00000623414 4170 ntBASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 AP000974.1-201ENST00000623909 2387 ntBASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 TNXA-203ENST00000507684 2038 ntBASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 AC005332.7-201ENST00000614046 2005 ntBASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC71LQ8N9Z2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 KRT87P-202ENST00000534226 1464 ntBASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC71LQ8N9Z2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 BX119927.1-201ENST00000636596 1552 ntBASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms