Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 AL445675.2-201ENST00000620291 557 ntBASIC28.12■■■□□ 2.09
XRN1Q8IZH2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 TSPY14P-201ENST00000303979 915 ntBASIC28.11■■■□□ 2.09
XRN1Q8IZH2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC28.11■■■□□ 2.09
XRN1Q8IZH2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
XRN1Q8IZH2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 ECEL1P2-202ENST00000465689 757 ntBASIC28.09■■■□□ 2.09
XRN1Q8IZH2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 FAM87A-204ENST00000613235 858 ntBASIC28.09■■■□□ 2.09
XRN1Q8IZH2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 AC063952.2-201ENST00000498792 1227 ntBASIC28.09■■■□□ 2.09
XRN1Q8IZH2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
XRN1Q8IZH2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
XRN1Q8IZH2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 NMU-205ENST00000511469 756 ntTSL 3 BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 FSCN1P1-201ENST00000568912 1481 ntBASIC28.07■■■□□ 2.08
XRN1Q8IZH2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
XRN1Q8IZH2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 CRYGFP-201ENST00000418459 633 ntBASIC28.06■■■□□ 2.08
XRN1Q8IZH2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
XRN1Q8IZH2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC28.05■■■□□ 2.08
XRN1Q8IZH2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms