Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 AP001412.1-201ENST00000608405 714 ntBASIC20.47■□□□□ 0.87
CHPFQ8IZ52 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHPFQ8IZ52 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 AC023632.3-201ENST00000521633 145 ntBASIC20.46■□□□□ 0.87
CHPFQ8IZ52 AC073912.3-201ENST00000624414 853 ntBASIC20.46■□□□□ 0.87
CHPFQ8IZ52 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.46■□□□□ 0.87
CHPFQ8IZ52 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.45■□□□□ 0.87
CHPFQ8IZ52 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.45■□□□□ 0.86
CHPFQ8IZ52 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
CHPFQ8IZ52 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 TSPY7P-201ENST00000431358 1114 ntBASIC20.44■□□□□ 0.86
CHPFQ8IZ52 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 AL049637.2-201ENST00000641778 930 ntBASIC20.44■□□□□ 0.86
CHPFQ8IZ52 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 KRT17P2-201ENST00000300992 1314 ntBASIC20.44■□□□□ 0.86
CHPFQ8IZ52 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHPFQ8IZ52 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHPFQ8IZ52 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.42■□□□□ 0.86
CHPFQ8IZ52 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms