Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM50Q86XT4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM50Q86XT4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM50Q86XT4 AC005229.4-201ENST00000610085 2198 ntBASIC22.45■■□□□ 1.18
TRIM50Q86XT4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM50Q86XT4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 RPS2P55-201ENST00000397318 883 ntBASIC22.44■■□□□ 1.18
TRIM50Q86XT4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 AC107956.1-201ENST00000494359 873 ntBASIC22.44■■□□□ 1.18
TRIM50Q86XT4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 AC233702.5-201ENST00000584107 538 ntBASIC22.44■■□□□ 1.18
TRIM50Q86XT4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM50Q86XT4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 AC012618.2-201ENST00000428058 849 ntBASIC22.43■■□□□ 1.18
TRIM50Q86XT4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM50Q86XT4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 TSPY7P-201ENST00000431358 1114 ntBASIC22.42■■□□□ 1.18
TRIM50Q86XT4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM50Q86XT4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM50Q86XT4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM50Q86XT4 AC006128.1-201ENST00000624704 1661 ntBASIC22.39■■□□□ 1.18
TRIM50Q86XT4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 PRKY-204ENST00000533551 1019 ntBASIC22.39■■□□□ 1.17
TRIM50Q86XT4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 AL049637.2-201ENST00000641778 930 ntBASIC22.39■■□□□ 1.17
TRIM50Q86XT4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
TRIM50Q86XT4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms