Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.06■□□□□ 0.32
CSMD2Q7Z408 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 AC116407.4-201ENST00000623319 1061 ntBASIC17.05■□□□□ 0.32
CSMD2Q7Z408 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 AL356652.1-201ENST00000615962 565 ntBASIC17.05■□□□□ 0.32
CSMD2Q7Z408 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.05■□□□□ 0.32
CSMD2Q7Z408 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 LINC01238-205ENST00000567549 1107 ntBASIC17.04■□□□□ 0.32
CSMD2Q7Z408 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.04■□□□□ 0.32
CSMD2Q7Z408 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.04■□□□□ 0.32
CSMD2Q7Z408 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSMD2Q7Z408 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 AP005242.2-201ENST00000580065 1175 ntBASIC17.03■□□□□ 0.32
CSMD2Q7Z408 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 PCED1CP-201ENST00000419887 785 ntBASIC17.03■□□□□ 0.32
CSMD2Q7Z408 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.03■□□□□ 0.32
CSMD2Q7Z408 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 AC069148.1-201ENST00000608741 768 ntBASIC17.02■□□□□ 0.32
CSMD2Q7Z408 AL138966.2-201ENST00000621997 464 ntBASIC17.02■□□□□ 0.32
CSMD2Q7Z408 CR392000.1-201ENST00000624770 1228 ntBASIC17.02■□□□□ 0.32
CSMD2Q7Z408 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD2Q7Z408 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 KRT8P10-201ENST00000450021 1447 ntBASIC17.02■□□□□ 0.31
CSMD2Q7Z408 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.02■□□□□ 0.31
CSMD2Q7Z408 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD2Q7Z408 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD2Q7Z408 B3GAT3P1-201ENST00000471720 806 ntBASIC17.01■□□□□ 0.31
CSMD2Q7Z408 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.01■□□□□ 0.31
CSMD2Q7Z408 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD2Q7Z408 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.01■□□□□ 0.31
CSMD2Q7Z408 AL031985.4-201ENST00000642138 673 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms