Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.77■□□□□ 0.6
RTL4Q6ZR62 AP005212.1-201ENST00000581547 1997 ntBASIC18.77■□□□□ 0.59
RTL4Q6ZR62 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.77■□□□□ 0.59
RTL4Q6ZR62 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.77■□□□□ 0.59
RTL4Q6ZR62 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTL4Q6ZR62 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RTL4Q6ZR62 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTL4Q6ZR62 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL4Q6ZR62 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTL4Q6ZR62 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 AC007225.1-201ENST00000566331 1836 ntBASIC18.74■□□□□ 0.59
RTL4Q6ZR62 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 ABHD17AP1-201ENST00000358206 933 ntBASIC18.74■□□□□ 0.59
RTL4Q6ZR62 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 AL356652.1-201ENST00000615962 565 ntBASIC18.74■□□□□ 0.59
RTL4Q6ZR62 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 AC073314.1-201ENST00000568729 2216 ntBASIC18.74■□□□□ 0.59
RTL4Q6ZR62 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms