Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 AC142381.4-202ENST00000563973 229 ntBASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDPD4Q6W3E5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 GCSHP5-201ENST00000443090 522 ntBASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.15■□□□□ 0.82
GDPD4Q6W3E5 SMG8-203ENST00000578922 2178 ntBASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 AC020907.5-201ENST00000624372 1936 ntBASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 AL158047.1-201ENST00000445918 881 ntBASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 C1QBPP2-201ENST00000528754 825 ntBASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.14■□□□□ 0.81
GDPD4Q6W3E5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 MTDHP1-201ENST00000605323 784 ntBASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 AC124283.5-201ENST00000624661 1809 ntBASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
GDPD4Q6W3E5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 RPPH1-201ENST00000516869 333 ntBASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 AL359736.2-201ENST00000621992 437 ntBASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 AC073314.1-201ENST00000568729 2216 ntBASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDPD4Q6W3E5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GDPD4Q6W3E5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDPD4Q6W3E5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms