Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 AC007322.4-201ENST00000509611 723 ntBASIC18.7■□□□□ 0.58
REEP3Q6NUK4 AC013268.1-206ENST00000638368 961 ntBASIC18.7■□□□□ 0.58
REEP3Q6NUK4 AC112229.1-201ENST00000639295 961 ntBASIC18.7■□□□□ 0.58
REEP3Q6NUK4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 AL158211.5-201ENST00000623583 2518 ntBASIC18.69■□□□□ 0.58
REEP3Q6NUK4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.69■□□□□ 0.58
REEP3Q6NUK4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.69■□□□□ 0.58
REEP3Q6NUK4 KRT18P11-201ENST00000435214 1283 ntBASIC18.69■□□□□ 0.58
REEP3Q6NUK4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
REEP3Q6NUK4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
REEP3Q6NUK4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
REEP3Q6NUK4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
REEP3Q6NUK4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms