Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 MIR4787-201ENST00000607364 84 ntBASIC18.89■□□□□ 0.61
LPCAT4Q643R3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 AL133373.2-201ENST00000623187 2828 ntBASIC18.89■□□□□ 0.61
LPCAT4Q643R3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LPCAT4Q643R3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LPCAT4Q643R3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 AC009113.1-201ENST00000570267 2443 ntBASIC18.87■□□□□ 0.61
LPCAT4Q643R3 SMUG1P1-201ENST00000590640 811 ntBASIC18.87■□□□□ 0.61
LPCAT4Q643R3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 MIR2861-201ENST00000636310 90 ntBASIC18.87■□□□□ 0.61
LPCAT4Q643R3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LPCAT4Q643R3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 BX119927.1-201ENST00000636596 1552 ntBASIC18.86■□□□□ 0.61
LPCAT4Q643R3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 AP005435.1-201ENST00000529293 1178 ntBASIC18.86■□□□□ 0.61
LPCAT4Q643R3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.86■□□□□ 0.61
LPCAT4Q643R3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LPCAT4Q643R3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LPCAT4Q643R3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms