Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 SPDYE13P-201ENST00000445314 798 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 KRT16P1-201ENST00000399124 1418 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 AC004870.1-201ENST00000315132 882 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 AP002383.4-201ENST00000442518 975 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 MIR940-201ENST00000401276 94 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 B3GAT3P1-201ENST00000471720 806 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 AC140113.2-201ENST00000604370 208 ntBASIC10.81□□□□□ -0.68
RNF213Q63HN8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 MIR1233-2-201ENST00000408138 82 ntBASIC10.81□□□□□ -0.68
RNF213Q63HN8 MIR1233-1-201ENST00000408722 82 ntBASIC10.81□□□□□ -0.68
RNF213Q63HN8 BX842568.4-201ENST00000421222 227 ntBASIC10.81□□□□□ -0.68
RNF213Q63HN8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 AC008040.2-201ENST00000461049 708 ntBASIC10.81□□□□□ -0.68
RNF213Q63HN8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 AP003733.4-201ENST00000623785 1697 ntBASIC10.81□□□□□ -0.68
RNF213Q63HN8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RNF213Q63HN8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
RNF213Q63HN8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 HIST1H2APS4-201ENST00000362070 348 ntBASIC10.8□□□□□ -0.68
RNF213Q63HN8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 ABR-217ENST00000572441 563 ntTSL 4 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 AC091304.2-201ENST00000564639 760 ntBASIC10.8□□□□□ -0.68
RNF213Q63HN8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 TSPY12P-201ENST00000421279 868 ntBASIC10.8□□□□□ -0.68
RNF213Q63HN8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 ABCB10P4-201ENST00000566803 2184 ntBASIC10.8□□□□□ -0.68
RNF213Q63HN8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 AC092338.2-201ENST00000568827 1415 ntBASIC10.8□□□□□ -0.68
RNF213Q63HN8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RNF213Q63HN8 HTR5BP-201ENST00000430851 1154 ntBASIC10.8□□□□□ -0.68
RNF213Q63HN8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC10.8□□□□□ -0.68
RNF213Q63HN8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms