Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 MIR638-201ENST00000385237 100 ntBASIC19.27■□□□□ 0.68
RNF220Q5VTB9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF220Q5VTB9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF220Q5VTB9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF220Q5VTB9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 AC027612.3-201ENST00000413684 1047 ntBASIC19.26■□□□□ 0.67
RNF220Q5VTB9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 MIR6084-201ENST00000622012 110 ntBASIC19.26■□□□□ 0.67
RNF220Q5VTB9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF220Q5VTB9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF220Q5VTB9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF220Q5VTB9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 KRT87P-202ENST00000534226 1464 ntBASIC19.23■□□□□ 0.67
RNF220Q5VTB9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 AC079140.4-201ENST00000507448 529 ntBASIC19.23■□□□□ 0.67
RNF220Q5VTB9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 AC005332.7-201ENST00000614046 2005 ntBASIC19.23■□□□□ 0.67
RNF220Q5VTB9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF220Q5VTB9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 AC020916.1-201ENST00000587762 1774 ntBASIC19.22■□□□□ 0.67
RNF220Q5VTB9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms