Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 CDV3P1-201ENST00000471403 739 ntBASIC20.19■□□□□ 0.82
LGSNQ5TDP6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.19■□□□□ 0.82
LGSNQ5TDP6 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LGSNQ5TDP6 RBM17P2-201ENST00000616397 1405 ntBASIC20.19■□□□□ 0.82
LGSNQ5TDP6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 PGM5P4-201ENST00000421970 445 ntBASIC20.18■□□□□ 0.82
LGSNQ5TDP6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
LGSNQ5TDP6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.18■□□□□ 0.82
LGSNQ5TDP6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.17■□□□□ 0.82
LGSNQ5TDP6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LGSNQ5TDP6 RNF165-205ENST00000588679 2904 ntBASIC20.16■□□□□ 0.82
LGSNQ5TDP6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LGSNQ5TDP6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms