Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 C1QL1P1-201ENST00000568105 661 ntBASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 RBM17P1-201ENST00000453646 1190 ntBASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 AC010331.1-201ENST00000611423 582 ntBASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC18Q5T9S5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 AL355355.2-201ENST00000442321 338 ntBASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC31.21■■■□□ 2.59
CCDC18Q5T9S5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC18Q5T9S5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC31.2■■■□□ 2.59
CCDC18Q5T9S5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC18Q5T9S5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
CCDC18Q5T9S5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC18Q5T9S5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC18Q5T9S5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.2■■■□□ 2.58
CCDC18Q5T9S5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 PLK5-205ENST00000642079 1969 ntBASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 AP002982.1-201ENST00000492365 877 ntBASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC18Q5T9S5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 MIR1224-201ENST00000408193 85 ntBASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 KRT18P21-201ENST00000515767 1272 ntBASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC18Q5T9S5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC18Q5T9S5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 KRT16P1-201ENST00000399124 1418 ntBASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC18Q5T9S5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 KRT8P17-201ENST00000453110 1448 ntBASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC18Q5T9S5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 KSR1P1-201ENST00000446298 240 ntBASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms