Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC58Q4VC31 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC58Q4VC31 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC58Q4VC31 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC58Q4VC31 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC58Q4VC31 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC58Q4VC31 AC125437.2-201ENST00000625180 2167 ntBASIC17.89■□□□□ 0.45
CCDC58Q4VC31 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 KRT87P-202ENST00000534226 1464 ntBASIC17.88■□□□□ 0.45
CCDC58Q4VC31 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 EDA-201ENST00000338901 1233 ntBASIC17.88■□□□□ 0.45
CCDC58Q4VC31 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 AC116562.4-201ENST00000641316 2276 ntBASIC17.88■□□□□ 0.45
CCDC58Q4VC31 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC58Q4VC31 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 AC138907.5-202ENST00000569484 235 ntBASIC17.87■□□□□ 0.45
CCDC58Q4VC31 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.87■□□□□ 0.45
CCDC58Q4VC31 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 RASA4CP-201ENST00000424092 1398 ntBASIC17.87■□□□□ 0.45
CCDC58Q4VC31 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC58Q4VC31 TMEM179-206ENST00000616017 1645 ntBASIC17.87■□□□□ 0.45
CCDC58Q4VC31 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 NOC2LP1-202ENST00000452600 2235 ntBASIC17.86■□□□□ 0.45
CCDC58Q4VC31 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 AL354811.1-201ENST00000610286 706 ntBASIC17.86■□□□□ 0.45
CCDC58Q4VC31 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC58Q4VC31 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC58Q4VC31 TNXA-203ENST00000507684 2038 ntBASIC17.85■□□□□ 0.45
CCDC58Q4VC31 AP001330.3-201ENST00000520123 633 ntBASIC17.85■□□□□ 0.45
CCDC58Q4VC31 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms