Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YOR029WYOR029W 336 nt1.16□□□□□ -2.22
RUP1Q12242 YGR130CYGR130C 2451 nt1.16□□□□□ -2.22
RUP1Q12242 BUD3YCL014W 4911 nt1.16□□□□□ -2.22
RUP1Q12242 GIM4YEL003W 336 nt1.15□□□□□ -2.23
RUP1Q12242 PKH2YOL100W 3246 nt1.15□□□□□ -2.23
RUP1Q12242 snR56snR56 88 nt1.14□□□□□ -2.23
RUP1Q12242 YAL063C-AYAL063C-A 291 nt1.14□□□□□ -2.23
RUP1Q12242 YAR029WYAR029W 225 nt1.14□□□□□ -2.23
RUP1Q12242 AIM44YPL158C 2277 nt1.14□□□□□ -2.23
RUP1Q12242 ALY2YJL084C 3141 nt1.13□□□□□ -2.23
RUP1Q12242 YDL206WYDL206W 2289 nt1.13□□□□□ -2.23
RUP1Q12242 SPO75YLL005C 2607 nt1.13□□□□□ -2.23
RUP1Q12242 HTB2YBL002W 396 nt1.13□□□□□ -2.23
RUP1Q12242 MMS4YBR098W 2076 nt1.12□□□□□ -2.23
RUP1Q12242 YHR007C-AYHR007C-A 216 nt1.12□□□□□ -2.23
RUP1Q12242 YHR175W-AYHR175W-A 150 nt1.12□□□□□ -2.23
RUP1Q12242 YAF9YNL107W 681 nt1.12□□□□□ -2.23
RUP1Q12242 YPR197CYPR197C 564 nt1.12□□□□□ -2.23
RUP1Q12242 NUP145YGL092W 3954 nt1.12□□□□□ -2.23
RUP1Q12242 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
RUP1Q12242 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
RUP1Q12242 RPL34BYIL052C 366 nt1.11□□□□□ -2.23
RUP1Q12242 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
RUP1Q12242 IFH1YLR223C 3258 nt1.11□□□□□ -2.23
RUP1Q12242 PDE2YOR360C 1581 nt1.1□□□□□ -2.23
RUP1Q12242 IML1YJR138W 4755 nt1.1□□□□□ -2.23
RUP1Q12242 YDR048CYDR048C 315 nt1.1□□□□□ -2.23
RUP1Q12242 GPG1YGL121C 381 nt1.1□□□□□ -2.23
RUP1Q12242 YCS4YLR272C 3531 nt1.1□□□□□ -2.23
RUP1Q12242 GEA2YEL022W 4380 nt1.09□□□□□ -2.23
RUP1Q12242 VAM6YDL077C 3150 nt1.09□□□□□ -2.23
RUP1Q12242 YAR009CYAR009C 3591 nt1.09□□□□□ -2.23
RUP1Q12242 YBR206WYBR206W 324 nt1.09□□□□□ -2.23
RUP1Q12242 SIP4YJL089W 2490 nt1.09□□□□□ -2.24
RUP1Q12242 YDR169C-AYDR169C-A 150 nt1.08□□□□□ -2.24
RUP1Q12242 tR(ACG)Q2tR(ACG)Q2 74 nt1.08□□□□□ -2.24
RUP1Q12242 YBR200W-AYBR200W-A 165 nt1.08□□□□□ -2.24
RUP1Q12242 CUL3YGR003W 2235 nt1.08□□□□□ -2.24
RUP1Q12242 YCK3YER123W 1575 nt1.08□□□□□ -2.24
RUP1Q12242 TTI1YKL033W 3117 nt1.07□□□□□ -2.24
RUP1Q12242 YLL007CYLL007C 1998 nt1.07□□□□□ -2.24
RUP1Q12242 YDR521WYDR521W 336 nt1.07□□□□□ -2.24
RUP1Q12242 APL1YJR005W 2103 nt1.06□□□□□ -2.24
RUP1Q12242 YPL225WYPL225W 441 nt1.06□□□□□ -2.24
RUP1Q12242 YBR064WYBR064W 429 nt1.06□□□□□ -2.24
RUP1Q12242 WAR1YML076C 2835 nt1.05□□□□□ -2.24
RUP1Q12242 SSS1YDR086C 243 nt1.05□□□□□ -2.24
RUP1Q12242 YDR102CYDR102C 333 nt1.05□□□□□ -2.24
RUP1Q12242 YIR044CYIR044C 186 nt1.05□□□□□ -2.24
RUP1Q12242 TAR1YLR154W-C 375 nt1.04□□□□□ -2.24
RUP1Q12242 OST1YJL002C 1431 nt1.04□□□□□ -2.24
RUP1Q12242 NST1YNL091W 3723 nt1.03□□□□□ -2.24
RUP1Q12242 YHL046W-AYHL046W-A 327 nt1.03□□□□□ -2.24
RUP1Q12242 NUP157YER105C 4176 nt1.02□□□□□ -2.25
RUP1Q12242 ECM12YHR021W-A 456 nt1.02□□□□□ -2.25
RUP1Q12242 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
RUP1Q12242 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
RUP1Q12242 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
RUP1Q12242 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
RUP1Q12242 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
RUP1Q12242 PAN2YGL094C 3348 nt1.01□□□□□ -2.25
RUP1Q12242 PTP2YOR208W 2253 nt1□□□□□ -2.25
RUP1Q12242 YIL115W-AYIL115W-A 372 nt1□□□□□ -2.25
RUP1Q12242 YPL038W-AYPL038W-A 192 nt1□□□□□ -2.25
RUP1Q12242 YDL240C-AYDL240C-A 138 nt0.99□□□□□ -2.25
RUP1Q12242 BEM2YER155C 6504 nt0.99□□□□□ -2.25
RUP1Q12242 MCM10YIL150C 1716 nt0.98□□□□□ -2.25
RUP1Q12242 YDR344CYDR344C 444 nt0.98□□□□□ -2.25
RUP1Q12242 YHL042WYHL042W 453 nt0.98□□□□□ -2.25
RUP1Q12242 INA22YIR024C 651 nt0.98□□□□□ -2.25
RUP1Q12242 YJL120WYJL120W 324 nt0.98□□□□□ -2.25
RUP1Q12242 RPS25BYLR333C 327 nt0.98□□□□□ -2.25
RUP1Q12242 snR36snR36 182 nt0.98□□□□□ -2.25
RUP1Q12242 DBP6YNR038W 1890 nt0.98□□□□□ -2.25
RUP1Q12242 SPO21YOL091W 1830 nt0.98□□□□□ -2.25
RUP1Q12242 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
RUP1Q12242 YDL196WYDL196W 330 nt0.97□□□□□ -2.25
RUP1Q12242 YOR011W-AYOR011W-A 207 nt0.97□□□□□ -2.25
RUP1Q12242 HMRA2YCR096C 360 nt0.96□□□□□ -2.26
RUP1Q12242 NHP2YDL208W 471 nt0.96□□□□□ -2.26
RUP1Q12242 SMC1YFL008W 3678 nt0.95□□□□□ -2.26
RUP1Q12242 ROM2YLR371W 4071 nt0.95□□□□□ -2.26
RUP1Q12242 OLI1Q0130 231 nt0.95□□□□□ -2.26
RUP1Q12242 YFL032WYFL032W 321 nt0.94□□□□□ -2.26
RUP1Q12242 STF2YGR008C 255 nt0.94□□□□□ -2.26
RUP1Q12242 snR60snR60 104 nt0.93□□□□□ -2.26
RUP1Q12242 ATP6Q0085 780 nt0.93□□□□□ -2.26
RUP1Q12242 HUG1YML058W-A 207 nt0.93□□□□□ -2.26
RUP1Q12242 SGF11YPL047W 300 nt0.93□□□□□ -2.26
RUP1Q12242 YPR117WYPR117W 7470 nt0.92□□□□□ -2.26
RUP1Q12242 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
RUP1Q12242 BFR2YDR299W 1605 nt0.92□□□□□ -2.26
RUP1Q12242 COG8YML071C 1824 nt0.92□□□□□ -2.26
RUP1Q12242 YDR183C-AYDR183C-A 258 nt0.91□□□□□ -2.26
RUP1Q12242 YDR413CYDR413C 576 nt0.91□□□□□ -2.26
RUP1Q12242 ALG13YGL047W 609 nt0.91□□□□□ -2.26
RUP1Q12242 YIL032CYIL032C 357 nt0.91□□□□□ -2.26
RUP1Q12242 KAP120YPL125W 3099 nt0.91□□□□□ -2.26
RUP1Q12242 HTL1YCR020W-B 237 nt0.9□□□□□ -2.27
RUP1Q12242 YFL063WYFL063W 456 nt0.89□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms