Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 GIP3YPL137C 3831 nt2.57□□□□□ -2
MSH6Q03834 NEW1YPL226W 3591 nt2.56□□□□□ -2
MSH6Q03834 SPF1YEL031W 3648 nt2.55□□□□□ -2
MSH6Q03834 YFR016CYFR016C 3702 nt2.55□□□□□ -2
MSH6Q03834 ENV11YGR071C 2583 nt2.55□□□□□ -2
MSH6Q03834 tS(GCU)Q1tS(GCU)Q1 86 nt2.55□□□□□ -2
MSH6Q03834 MET18YIL128W 3099 nt2.55□□□□□ -2
MSH6Q03834 YIL134C-AYIL134C-A 204 nt2.55□□□□□ -2
MSH6Q03834 YOR055WYOR055W 435 nt2.55□□□□□ -2
MSH6Q03834 SBE22YHR103W 2559 nt2.55□□□□□ -2
MSH6Q03834 APL2YKL135C 2181 nt2.54□□□□□ -2
MSH6Q03834 IRA2YOL081W 9240 nt2.54□□□□□ -2
MSH6Q03834 TRS130YMR218C 3309 nt2.54□□□□□ -2
MSH6Q03834 PTP2YOR208W 2253 nt2.54□□□□□ -2
MSH6Q03834 KRE33YNL132W 3171 nt2.54□□□□□ -2
MSH6Q03834 SLD3YGL113W 2007 nt2.54□□□□□ -2
MSH6Q03834 EDS1YBR033W 2760 nt2.54□□□□□ -2
MSH6Q03834 SCD5YOR329C 2619 nt2.54□□□□□ -2
MSH6Q03834 PDR11YIL013C 4236 nt2.53□□□□□ -2
MSH6Q03834 PBY1YBR094W 2262 nt2.53□□□□□ -2
MSH6Q03834 MLH3YPL164C 2148 nt2.53□□□□□ -2
MSH6Q03834 PHO91YNR013C 2685 nt2.53□□□□□ -2
MSH6Q03834 YLL066W-BYLL066W-B 171 nt2.53□□□□□ -2
MSH6Q03834 RPS29AYLR388W 171 nt2.53□□□□□ -2
MSH6Q03834 SVL3YPL032C 2478 nt2.53□□□□□ -2
MSH6Q03834 FAR11YNL127W 2862 nt2.53□□□□□ -2
MSH6Q03834 TUS1YLR425W 3924 nt2.53□□□□□ -2
MSH6Q03834 RAV1YJR033C 4074 nt2.52□□□□□ -2.01
MSH6Q03834 YBR206WYBR206W 324 nt2.52□□□□□ -2.01
MSH6Q03834 CTF4YPR135W 2784 nt2.52□□□□□ -2.01
MSH6Q03834 VPS8YAL002W 3825 nt2.51□□□□□ -2.01
MSH6Q03834 snR45snR45 172 nt2.5□□□□□ -2.01
MSH6Q03834 SSD1YDR293C 3753 nt2.5□□□□□ -2.01
MSH6Q03834 TRL1YJL087C 2484 nt2.5□□□□□ -2.01
MSH6Q03834 CSF1YLR087C 8877 nt2.5□□□□□ -2.01
MSH6Q03834 CDC60YPL160W 3273 nt2.5□□□□□ -2.01
MSH6Q03834 YDL118WYDL118W 381 nt2.49□□□□□ -2.01
MSH6Q03834 MSH5YDL154W 2706 nt2.48□□□□□ -2.01
MSH6Q03834 YOL098CYOL098C 3114 nt2.48□□□□□ -2.01
MSH6Q03834 PET309YLR067C 2898 nt2.47□□□□□ -2.01
MSH6Q03834 SAP190YKR028W 3102 nt2.47□□□□□ -2.01
MSH6Q03834 HMI1YOL095C 2121 nt2.47□□□□□ -2.01
MSH6Q03834 NUP170YBL079W 4509 nt2.47□□□□□ -2.01
MSH6Q03834 YIL156W-BYIL156W-B 222 nt2.47□□□□□ -2.01
MSH6Q03834 CMC4YMR194C-B 222 nt2.47□□□□□ -2.01
MSH6Q03834 NAB6YML117W 3405 nt2.46□□□□□ -2.02
MSH6Q03834 SYH1YPL105C 2550 nt2.46□□□□□ -2.02
MSH6Q03834 STE11YLR362W 2154 nt2.45□□□□□ -2.02
MSH6Q03834 BUD2YKL092C 3315 nt2.45□□□□□ -2.02
MSH6Q03834 YKR075W-AYKR075W-A 270 nt2.45□□□□□ -2.02
MSH6Q03834 ALK1YGL021W 2283 nt2.45□□□□□ -2.02
MSH6Q03834 AGC1YPR021C 2709 nt2.45□□□□□ -2.02
MSH6Q03834 TOF1YNL273W 3717 nt2.44□□□□□ -2.02
MSH6Q03834 YDR354C-AYDR354C-A 144 nt2.44□□□□□ -2.02
MSH6Q03834 RPS30BYOR182C 192 nt2.44□□□□□ -2.02
MSH6Q03834 MSB1YOR188W 3414 nt2.44□□□□□ -2.02
MSH6Q03834 KOG1YHR186C 4674 nt2.44□□□□□ -2.02
MSH6Q03834 IRE1YHR079C 3348 nt2.43□□□□□ -2.02
MSH6Q03834 YOR019WYOR019W 2193 nt2.43□□□□□ -2.02
MSH6Q03834 YCR038W-AYCR038W-A 126 nt2.43□□□□□ -2.02
MSH6Q03834 YCR087C-AYCR087C-A 462 nt2.43□□□□□ -2.02
MSH6Q03834 RPL37BYDR500C 267 nt2.43□□□□□ -2.02
MSH6Q03834 SOM1YEL059C-A 225 nt2.43□□□□□ -2.02
MSH6Q03834 CTR9YOL145C 3234 nt2.43□□□□□ -2.02
MSH6Q03834 RCO1YMR075W 2055 nt2.42□□□□□ -2.02
MSH6Q03834 YDR521WYDR521W 336 nt2.42□□□□□ -2.02
MSH6Q03834 PKH2YOL100W 3246 nt2.42□□□□□ -2.02
MSH6Q03834 STF2YGR008C 255 nt2.41□□□□□ -2.02
MSH6Q03834 YHR180W-AYHR180W-A 183 nt2.41□□□□□ -2.02
MSH6Q03834 IFH1YLR223C 3258 nt2.41□□□□□ -2.02
MSH6Q03834 UBP1YDL122W 2430 nt2.4□□□□□ -2.02
MSH6Q03834 SCP160YJL080C 3669 nt2.4□□□□□ -2.03
MSH6Q03834 FRK1YPL141C 2598 nt2.39□□□□□ -2.03
MSH6Q03834 COX12YLR038C 252 nt2.39□□□□□ -2.03
MSH6Q03834 STH1YIL126W 4080 nt2.39□□□□□ -2.03
MSH6Q03834 TIM9YEL020W-A 264 nt2.38□□□□□ -2.03
MSH6Q03834 YMR175W-AYMR175W-A 195 nt2.38□□□□□ -2.03
MSH6Q03834 YGR109W-BYGR109W-B 4644 nt2.38□□□□□ -2.03
MSH6Q03834 HSL1YKL101W 4557 nt2.37□□□□□ -2.03
MSH6Q03834 COG4YPR105C 2586 nt2.37□□□□□ -2.03
MSH6Q03834 BNI1YNL271C 5862 nt2.37□□□□□ -2.03
MSH6Q03834 YLR035C-AYLR035C-A 3468 nt2.36□□□□□ -2.03
MSH6Q03834 SLI15YBR156C 2097 nt2.35□□□□□ -2.03
MSH6Q03834 RTT101YJL047C 2529 nt2.35□□□□□ -2.03
MSH6Q03834 YNL144CYNL144C 2223 nt2.35□□□□□ -2.03
MSH6Q03834 RTT107YHR154W 3213 nt2.35□□□□□ -2.03
MSH6Q03834 SEC63YOR254C 1992 nt2.34□□□□□ -2.03
MSH6Q03834 YJL026C-AYJL026C-A 222 nt2.34□□□□□ -2.03
MSH6Q03834 INO80YGL150C 4470 nt2.34□□□□□ -2.04
MSH6Q03834 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
MSH6Q03834 BPH1YCR032W 6504 nt2.32□□□□□ -2.04
MSH6Q03834 PRP5YBR237W 2550 nt2.32□□□□□ -2.04
MSH6Q03834 CHS6YJL099W 2241 nt2.32□□□□□ -2.04
MSH6Q03834 HIR3YJR140C 4947 nt2.32□□□□□ -2.04
MSH6Q03834 TTI1YKL033W 3117 nt2.32□□□□□ -2.04
MSH6Q03834 FKS1YLR342W 5631 nt2.31□□□□□ -2.04
MSH6Q03834 STB6YKL072W 2301 nt2.31□□□□□ -2.04
MSH6Q03834 UFD4YKL010C 4452 nt2.31□□□□□ -2.04
MSH6Q03834 YLL054CYLL054C 2532 nt2.31□□□□□ -2.04
MSH6Q03834 APL1YJR005W 2103 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms