Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDKL1Q00532 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CDKL1Q00532 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDKL1Q00532 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.73■□□□□ 0.75
CDKL1Q00532 AC008694.1-202ENST00000636953 945 ntBASIC19.73■□□□□ 0.75
CDKL1Q00532 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL1Q00532 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDKL1Q00532 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL1Q00532 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.72■□□□□ 0.75
CDKL1Q00532 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDKL1Q00532 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL1Q00532 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL1Q00532 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL1Q00532 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDKL1Q00532 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.72■□□□□ 0.75
CDKL1Q00532 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL1Q00532 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL1Q00532 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CDKL1Q00532 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.72■□□□□ 0.75
CDKL1Q00532 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDKL1Q00532 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDKL1Q00532 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDKL1Q00532 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.71■□□□□ 0.75
CDKL1Q00532 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.71■□□□□ 0.75
CDKL1Q00532 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 AL512625.2-201ENST00000417533 625 ntBASIC19.71■□□□□ 0.75
CDKL1Q00532 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CDKL1Q00532 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.71■□□□□ 0.75
CDKL1Q00532 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.71■□□□□ 0.75
CDKL1Q00532 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDKL1Q00532 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDKL1Q00532 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDKL1Q00532 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 AC099778.1-201ENST00000568593 1911 ntBASIC19.7■□□□□ 0.74
CDKL1Q00532 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 AC112907.3-201ENST00000577781 2400 ntBASIC19.7■□□□□ 0.74
CDKL1Q00532 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.7■□□□□ 0.74
CDKL1Q00532 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 CYP2T3P-201ENST00000601990 817 ntBASIC19.7■□□□□ 0.74
CDKL1Q00532 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 AC105020.6-201ENST00000621523 1217 ntBASIC19.7■□□□□ 0.74
CDKL1Q00532 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 DPP3P2-201ENST00000416030 1696 ntBASIC19.7■□□□□ 0.74
CDKL1Q00532 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CDKL1Q00532 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
CDKL1Q00532 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDKL1Q00532 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.69■□□□□ 0.74
CDKL1Q00532 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
CDKL1Q00532 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms