Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.64■□□□□ 0.417e-8■■□□□ 13.5
LSM11P83369 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.347e-8■■□□□ 13.5
LSM11P83369 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.93■□□□□ 0.37e-8■■□□□ 13.5
LSM11P83369 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.75■□□□□ 0.277e-8■■□□□ 13.5
LSM11P83369 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.43■□□□□ 0.227e-8■■□□□ 13.5
LSM11P83369 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.411e-7■■□□□ 13.5
LSM11P83369 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.58■■□□□ 1.367e-19■■□□□ 13.5
LSM11P83369 RCOR3-205ENST00000472734 452 ntTSL 219.15■□□□□ 0.667e-19■■□□□ 13.5
LSM11P83369 ATP1A1-208ENST00000488733 1728 ntTSL 218.57■□□□□ 0.561e-7■■□□□ 13.5
LSM11P83369 ATP1A1-204ENST00000418797 654 ntTSL 317.31■□□□□ 0.361e-7■■□□□ 13.5
LSM11P83369 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.43■□□□□ 0.067e-19■■□□□ 13.5
LSM11P83369 RCOR3-210ENST00000528408 570 ntTSL 214.8□□□□□ -0.047e-19■■□□□ 13.5
LSM11P83369 RCOR3-216ENST00000534478 564 ntTSL 414.61□□□□□ -0.077e-19■■□□□ 13.5
LSM11P83369 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.087e-19■■□□□ 13.5
LSM11P83369 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.146e-10■■□□□ 13.5
LSM11P83369 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.246e-10■■□□□ 13.5
LSM11P83369 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC13.41□□□□□ -0.261e-7■■□□□ 13.5
LSM11P83369 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.39□□□□□ -0.276e-10■■□□□ 13.5
LSM11P83369 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.276e-10■■□□□ 13.5
LSM11P83369 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.36e-10■■□□□ 13.5
LSM11P83369 STK3-205ENST00000518582 725 ntTSL 313.14□□□□□ -0.316e-10■■□□□ 13.5
LSM11P83369 STK3-202ENST00000424861 2065 ntTSL 213.14□□□□□ -0.316e-10■■□□□ 13.5
LSM11P83369 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.421e-7■■□□□ 13.5
LSM11P83369 RCOR3-211ENST00000528926 1497 ntTSL 211.85□□□□□ -0.517e-19■■□□□ 13.5
LSM11P83369 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.661e-7■■□□□ 13.5
LSM11P83369 RCOR3-212ENST00000529572 1022 ntTSL 510.84□□□□□ -0.677e-19■■□□□ 13.5
LSM11P83369 PCBD2-202ENST00000504352 961 ntTSL 59.95□□□□□ -0.821e-7■■□□□ 13.5
LSM11P83369 STK3-211ENST00000521649 574 ntTSL 49.83□□□□□ -0.846e-10■■□□□ 13.5
LSM11P83369 STK3-204ENST00000518165 817 ntTSL 1 (best)9.62□□□□□ -0.876e-10■■□□□ 13.5
LSM11P83369 ATF7IP2-205ENST00000535850 1907 ntTSL 29.12□□□□□ -0.951e-7■■□□□ 13.5
LSM11P83369 ATP1A1-202ENST00000369494 698 ntTSL 39.03□□□□□ -0.961e-7■■□□□ 13.5
LSM11P83369 UBR5-205ENST00000519365 602 ntTSL 38.24□□□□□ -1.096e-10■■□□□ 13.5
LSM11P83369 RCOR3-214ENST00000533469 540 ntTSL 48.18□□□□□ -1.17e-19■■□□□ 13.5
LSM11P83369 UBR5-208ENST00000520898 582 ntTSL 37.44□□□□□ -1.226e-10■■□□□ 13.5
LSM11P83369 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.281e-7■■□□□ 13.5
LSM11P83369 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.37□□□□□ -1.391e-7■■□□□ 13.5
LSM11P83369 PCBD2-203ENST00000510013 361 ntTSL 55.95□□□□□ -1.461e-7■■□□□ 13.5
LSM11P83369 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.471e-7■■□□□ 13.5
LSM11P83369 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.52□□□□□ -1.536e-10■■□□□ 13.5
LSM11P83369 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.34□□□□□ -1.551e-7■■□□□ 13.5
LSM11P83369 ATF7IP2-215ENST00000568027 3406 ntTSL 1 (best)5.02□□□□□ -1.611e-7■■□□□ 13.5
LSM11P83369 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.76□□□□□ -1.657e-19■■□□□ 13.5
LSM11P83369 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.651e-7■■□□□ 13.5
LSM11P83369 LTBP3-210ENST00000528516 3935 ntTSL 1 (best)16.63■□□□□ 0.252e-7■■□□□ 13.5
LSM11P83369 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.973e-6■■□□□ 13.5
LSM11P83369 IL17RE-204ENST00000434065 2541 ntTSL 221.03■□□□□ 0.963e-6■■□□□ 13.5
LSM11P83369 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19■□□□□ 0.633e-6■■□□□ 13.5
LSM11P83369 IL17RE-202ENST00000383815 2808 ntTSL 218.16■□□□□ 0.53e-6■■□□□ 13.5
LSM11P83369 VARS2-206ENST00000473916 2000 ntTSL 216.78■□□□□ 0.282e-6■■□□□ 13.5
LSM11P83369 GDPD5-217ENST00000534322 527 ntTSL 37.74□□□□□ -1.174e-7■■□□□ 13.5
LSM11P83369 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.442e-8■■□□□ 13.5
LSM11P83369 NPEPL1-205ENST00000527081 2061 ntTSL 216.61■□□□□ 0.256e-7■■□□□ 13.5
LSM11P83369 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.384e-6■■□□□ 13.5
LSM11P83369 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.4□□□□□ -0.424e-6■■□□□ 13.5
LSM11P83369 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.54■□□□□ 0.45e-7■■□□□ 13.4
LSM11P83369 GTF3C5-210ENST00000489842 696 ntTSL 27.88□□□□□ -1.152e-8■■□□□ 13.4
LSM11P83369 PNN-206ENST00000557680 912 ntTSL 310.06□□□□□ -0.85e-13■■□□□ 13.4
LSM11P83369 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.285e-13■■□□□ 13.4
LSM11P83369 SLC51A-208ENST00000475271 766 ntTSL 213.36□□□□□ -0.271e-9■■□□□ 13.4
LSM11P83369 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.311e-9■■□□□ 13.4
LSM11P83369 SLC51A-202ENST00000415111 742 ntTSL 313.07□□□□□ -0.321e-9■■□□□ 13.4
LSM11P83369 SLC51A-212ENST00000484407 1066 ntTSL 1 (best)11.35□□□□□ -0.591e-9■■□□□ 13.4
LSM11P83369 SLC51A-213ENST00000492794 482 ntTSL 27.23□□□□□ -1.251e-9■■□□□ 13.4
LSM11P83369 ENTPD5-204ENST00000555829 691 ntTSL 313.9□□□□□ -0.185e-7■■□□□ 13.4
LSM11P83369 GATD1-213ENST00000532320 1273 ntTSL 1 (best)14.62□□□□□ -0.071e-6■■□□□ 13.4
LSM11P83369 AP1G2-212ENST00000554554 2955 ntTSL 28.99□□□□□ -0.971e-8■■□□□ 13.4
LSM11P83369 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.97□□□□□ -0.495e-14■■□□□ 13.4
LSM11P83369 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.94□□□□□ -0.55e-14■■□□□ 13.4
LSM11P83369 GRIPAP1-212ENST00000619149 2828 ntTSL 211.46□□□□□ -0.585e-14■■□□□ 13.4
LSM11P83369 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.615e-14■■□□□ 13.4
LSM11P83369 MST1P2-201ENST00000457982 2291 ntBASIC13.69□□□□□ -0.223e-15■■□□□ 13.4
LSM11P83369 C19orf48-207ENST00000596655 1639 ntTSL 217.76■□□□□ 0.433e-6■■□□□ 13.4
LSM11P83369 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.353e-6■■□□□ 13.4
LSM11P83369 C19orf48-216ENST00000641834 1718 nt16.53■□□□□ 0.243e-6■■□□□ 13.4
LSM11P83369 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.043e-6■■□□□ 13.4
LSM11P83369 C19orf48-210ENST00000598463 1844 ntTSL 1 (best)12.9□□□□□ -0.343e-6■■□□□ 13.4
LSM11P83369 C19orf48-209ENST00000597705 892 ntTSL 310.96□□□□□ -0.653e-6■■□□□ 13.4
LSM11P83369 C19orf48-205ENST00000596287 827 ntTSL 210.19□□□□□ -0.783e-6■■□□□ 13.4
LSM11P83369 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.33e-6■■□□□ 13.4
LSM11P83369 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.333e-6■■□□□ 13.4
LSM11P83369 EHMT2-206ENST00000461880 1825 ntTSL 512.95□□□□□ -0.343e-6■■□□□ 13.4
LSM11P83369 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.373e-6■■□□□ 13.4
LSM11P83369 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.383e-6■■□□□ 13.4
LSM11P83369 EHMT2-210ENST00000478491 1517 ntTSL 510.56□□□□□ -0.723e-6■■□□□ 13.4
LSM11P83369 EHMT2-211ENST00000480912 3940 ntTSL 510.36□□□□□ -0.753e-6■■□□□ 13.4
LSM11P83369 EHMT2-212ENST00000494816 3036 ntTSL 510.15□□□□□ -0.783e-6■■□□□ 13.4
LSM11P83369 CLASRP-208ENST00000587472 345 ntTSL 216.93■□□□□ 0.31e-8■■□□□ 13.4
LSM11P83369 DHRS2-204ENST00000553600 844 ntTSL 213.12□□□□□ -0.311e-32■■□□□ 13.4
LSM11P83369 AC099668.1-201ENST00000563780 423 ntTSL 2 BASIC9.74□□□□□ -0.856e-8■■□□□ 13.4
LSM11P83369 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.54■□□□□ 0.083e-9■■□□□ 13.4
LSM11P83369 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.86□□□□□ -0.033e-9■■□□□ 13.4
LSM11P83369 SNHG15-204ENST00000579383 731 ntTSL 212.14□□□□□ -0.473e-9■■□□□ 13.4
LSM11P83369 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC11.67□□□□□ -0.543e-9■■□□□ 13.4
LSM11P83369 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC10.03□□□□□ -0.83e-9■■□□□ 13.4
LSM11P83369 SNHG15-208ENST00000584327 505 ntTSL 3 BASIC9.99□□□□□ -0.813e-9■■□□□ 13.4
LSM11P83369 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC9.63□□□□□ -0.873e-9■■□□□ 13.4
LSM11P83369 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.99■□□□□ 0.312e-8■■□□□ 13.4
LSM11P83369 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.78□□□□□ -0.042e-8■■□□□ 13.4
LSM11P83369 FBXO44-209ENST00000475435 942 ntTSL 312.25□□□□□ -0.452e-8■■□□□ 13.4
LSM11P83369 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.462e-8■■□□□ 13.4
Retrieved 100 of 11,495 protein–RNA pairs in 91.2 ms