Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.21■□□□□ 0.83
PRAMEP78395 KRT18P68-201ENST00000392293 1000 ntBASIC20.21■□□□□ 0.83
PRAMEP78395 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PRAMEP78395 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEP78395 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.21■□□□□ 0.83
PRAMEP78395 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEP78395 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEP78395 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEP78395 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEP78395 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEP78395 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PRAMEP78395 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEP78395 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEP78395 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEP78395 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
PRAMEP78395 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.2■□□□□ 0.82
PRAMEP78395 CYP2T3P-201ENST00000601990 817 ntBASIC20.2■□□□□ 0.82
PRAMEP78395 AC105020.6-201ENST00000621523 1217 ntBASIC20.2■□□□□ 0.82
PRAMEP78395 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEP78395 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEP78395 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEP78395 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEP78395 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEP78395 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.19■□□□□ 0.82
PRAMEP78395 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEP78395 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEP78395 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEP78395 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEP78395 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEP78395 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEP78395 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRAMEP78395 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEP78395 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEP78395 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRAMEP78395 AC010980.2-201ENST00000587099 1412 ntBASIC20.19■□□□□ 0.82
PRAMEP78395 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.18■□□□□ 0.82
PRAMEP78395 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.18■□□□□ 0.82
PRAMEP78395 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRAMEP78395 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.18■□□□□ 0.82
PRAMEP78395 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEP78395 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEP78395 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEP78395 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEP78395 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEP78395 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEP78395 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEP78395 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PRAMEP78395 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEP78395 AL512625.2-201ENST00000417533 625 ntBASIC20.17■□□□□ 0.82
PRAMEP78395 AL355472.2-201ENST00000422958 438 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms