Protein–RNA interactions for Protein: P63146

UBE2B, Ubiquitin-conjugating enzyme E2 B, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2BP63146 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.98□□□□□ -0.33
UBE2BP63146 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2BP63146 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2BP63146 RARRES2P6-201ENST00000567333 442 ntBASIC12.98□□□□□ -0.33
UBE2BP63146 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2BP63146 AC087623.3-201ENST00000607047 1098 ntBASIC12.98□□□□□ -0.33
UBE2BP63146 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBE2BP63146 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2BP63146 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UBE2BP63146 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBE2BP63146 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UBE2BP63146 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2BP63146 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2BP63146 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2BP63146 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2BP63146 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2BP63146 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2BP63146 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2BP63146 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2BP63146 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2BP63146 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.97□□□□□ -0.33
UBE2BP63146 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2BP63146 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 MIR5787-201ENST00000611784 55 ntBASIC12.97□□□□□ -0.33
UBE2BP63146 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12.97□□□□□ -0.33
UBE2BP63146 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2BP63146 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2BP63146 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2BP63146 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
UBE2BP63146 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UBE2BP63146 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
UBE2BP63146 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
UBE2BP63146 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UBE2BP63146 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2BP63146 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
UBE2BP63146 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.96□□□□□ -0.33
UBE2BP63146 KRT18P11-201ENST00000435214 1283 ntBASIC12.96□□□□□ -0.33
UBE2BP63146 UBE2DNL-204ENST00000602536 740 ntBASIC12.96□□□□□ -0.33
UBE2BP63146 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2BP63146 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
UBE2BP63146 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
UBE2BP63146 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2BP63146 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2BP63146 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2BP63146 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2BP63146 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2BP63146 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2BP63146 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2BP63146 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2BP63146 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2BP63146 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2BP63146 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms