Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLDN12P56749 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN12P56749 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLDN12P56749 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLDN12P56749 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.42■□□□□ 0.38
CLDN12P56749 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.42■□□□□ 0.38
CLDN12P56749 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN12P56749 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN12P56749 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN12P56749 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN12P56749 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN12P56749 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN12P56749 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 TREX1-205ENST00000625293 1783 ntBASIC17.41■□□□□ 0.38
CLDN12P56749 KRT16P2-201ENST00000414673 1423 ntBASIC17.41■□□□□ 0.38
CLDN12P56749 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN12P56749 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLDN12P56749 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN12P56749 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN12P56749 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 TPRG1LP1-201ENST00000598702 760 ntBASIC17.41■□□□□ 0.38
CLDN12P56749 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN12P56749 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN12P56749 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
CLDN12P56749 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN12P56749 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN12P56749 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 BX119927.1-201ENST00000636596 1552 ntBASIC17.4■□□□□ 0.38
CLDN12P56749 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN12P56749 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN12P56749 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN12P56749 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN12P56749 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN12P56749 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN12P56749 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.4■□□□□ 0.38
CLDN12P56749 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN12P56749 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 AC012414.1-201ENST00000556676 535 ntBASIC17.4■□□□□ 0.38
CLDN12P56749 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN12P56749 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN12P56749 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN12P56749 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN12P56749 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CLDN12P56749 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN12P56749 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms