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Protein–RNA interactions for Protein: P53238
PEF1, Peflin, yeast
Predictions only
Length
335 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
PEF1
P53238
VPS55
YJR044C
423 nt
1.77
□□□□□ -2.13
PEF1
P53238
YNL337W
YNL337W
255 nt
1.77
□□□□□ -2.13
PEF1
P53238
YOR302W
YOR302W
78 nt
1.77
□□□□□ -2.13
PEF1
P53238
PKH2
YOL100W
3246 nt
1.77
□□□□□ -2.13
PEF1
P53238
COG4
YPR105C
2586 nt
1.76
□□□□□ -2.13
PEF1
P53238
RRT15
YLR162W-A
189 nt
1.76
□□□□□ -2.13
PEF1
P53238
YLR419W
YLR419W
4308 nt
1.75
□□□□□ -2.13
PEF1
P53238
MON2
YNL297C
4911 nt
1.75
□□□□□ -2.13
PEF1
P53238
YCR018C-A
YCR018C-A
255 nt
1.75
□□□□□ -2.13
PEF1
P53238
EMC5
YIL027C
426 nt
1.75
□□□□□ -2.13
PEF1
P53238
YBR174C
YBR174C
315 nt
1.75
□□□□□ -2.13
PEF1
P53238
ALK1
YGL021W
2283 nt
1.75
□□□□□ -2.13
PEF1
P53238
PBY1
YBR094W
2262 nt
1.74
□□□□□ -2.13
PEF1
P53238
SGF11
YPL047W
300 nt
1.74
□□□□□ -2.13
PEF1
P53238
GYP5
YPL249C
2685 nt
1.73
□□□□□ -2.13
PEF1
P53238
PAM16
YJL104W
450 nt
1.73
□□□□□ -2.13
PEF1
P53238
YBR182C-A
YBR182C-A
195 nt
1.73
□□□□□ -2.13
PEF1
P53238
SMC4
YLR086W
4257 nt
1.73
□□□□□ -2.13
PEF1
P53238
YLR035C-A
YLR035C-A
3468 nt
1.73
□□□□□ -2.13
PEF1
P53238
YHR214C-B
YHR214C-B
5382 nt
1.73
□□□□□ -2.13
PEF1
P53238
YDR521W
YDR521W
336 nt
1.72
□□□□□ -2.13
PEF1
P53238
TDA9
YML081W
3756 nt
1.72
□□□□□ -2.13
PEF1
P53238
VPS15
YBR097W
4365 nt
1.71
□□□□□ -2.14
PEF1
P53238
YGL217C
YGL217C
342 nt
1.71
□□□□□ -2.14
PEF1
P53238
YKU70
YMR284W
1809 nt
1.7
□□□□□ -2.14
PEF1
P53238
SKI3
YPR189W
4299 nt
1.7
□□□□□ -2.14
PEF1
P53238
UFD2
YDL190C
2886 nt
1.7
□□□□□ -2.14
PEF1
P53238
SEC31
YDL195W
3822 nt
1.7
□□□□□ -2.14
PEF1
P53238
YIR030W-A
YIR030W-A
384 nt
1.7
□□□□□ -2.14
PEF1
P53238
YOR072W-B
YOR072W-B
162 nt
1.7
□□□□□ -2.14
PEF1
P53238
SLX4
YLR135W
2247 nt
1.7
□□□□□ -2.14
PEF1
P53238
OLI1
Q0130
231 nt
1.69
□□□□□ -2.14
PEF1
P53238
YJL022W
YJL022W
309 nt
1.69
□□□□□ -2.14
PEF1
P53238
YBR206W
YBR206W
324 nt
1.69
□□□□□ -2.14
PEF1
P53238
PIP2
YOR363C
2991 nt
1.69
□□□□□ -2.14
PEF1
P53238
PKH3
YDR466W
2697 nt
1.68
□□□□□ -2.14
PEF1
P53238
CTF4
YPR135W
2784 nt
1.68
□□□□□ -2.14
PEF1
P53238
YER172C-A
YER172C-A
381 nt
1.68
□□□□□ -2.14
PEF1
P53238
COF1
YLL050C
432 nt
1.68
□□□□□ -2.14
PEF1
P53238
YOR376W
YOR376W
369 nt
1.68
□□□□□ -2.14
PEF1
P53238
KIP1
YBL063W
3336 nt
1.68
□□□□□ -2.14
PEF1
P53238
AHC1
YOR023C
1701 nt
1.68
□□□□□ -2.14
PEF1
P53238
NUT1
YGL151W
3399 nt
1.67
□□□□□ -2.14
PEF1
P53238
YGR109W-B
YGR109W-B
4644 nt
1.67
□□□□□ -2.14
PEF1
P53238
YLL054C
YLL054C
2532 nt
1.67
□□□□□ -2.14
PEF1
P53238
IFH1
YLR223C
3258 nt
1.67
□□□□□ -2.14
PEF1
P53238
ADR1
YDR216W
3972 nt
1.66
□□□□□ -2.14
PEF1
P53238
TBS1
YBR150C
3285 nt
1.66
□□□□□ -2.14
PEF1
P53238
PEP1
YBL017C
4740 nt
1.66
□□□□□ -2.14
PEF1
P53238
YDL185C-A
YDL185C-A
228 nt
1.66
□□□□□ -2.14
PEF1
P53238
ECM12
YHR021W-A
456 nt
1.66
□□□□□ -2.14
PEF1
P53238
YOR093C
YOR093C
4947 nt
1.65
□□□□□ -2.14
PEF1
P53238
YLL019W-A
YLL019W-A
93 nt
1.65
□□□□□ -2.15
PEF1
P53238
snR14
snR14
160 nt
1.65
□□□□□ -2.15
PEF1
P53238
YDL206W
YDL206W
2289 nt
1.65
□□□□□ -2.15
PEF1
P53238
RTP1
YMR185W
2946 nt
1.64
□□□□□ -2.15
PEF1
P53238
YEL014C
YEL014C
306 nt
1.64
□□□□□ -2.15
PEF1
P53238
ISD11
YER048W-A
285 nt
1.64
□□□□□ -2.15
PEF1
P53238
YLR140W
YLR140W
327 nt
1.64
□□□□□ -2.15
PEF1
P53238
MYO2
YOR326W
4725 nt
1.63
□□□□□ -2.15
PEF1
P53238
AIM44
YPL158C
2277 nt
1.63
□□□□□ -2.15
PEF1
P53238
SLD3
YGL113W
2007 nt
1.63
□□□□□ -2.15
PEF1
P53238
YNL198C
YNL198C
303 nt
1.63
□□□□□ -2.15
PEF1
P53238
YBR131C-A
YBR131C-A
90 nt
1.63
□□□□□ -2.15
PEF1
P53238
MMS4
YBR098W
2076 nt
1.62
□□□□□ -2.15
PEF1
P53238
NCA2
YPR155C
1851 nt
1.62
□□□□□ -2.15
PEF1
P53238
MDS3
YGL197W
4464 nt
1.62
□□□□□ -2.15
PEF1
P53238
ULI1
YFR026C
510 nt
1.61
□□□□□ -2.15
PEF1
P53238
SBE22
YHR103W
2559 nt
1.61
□□□□□ -2.15
PEF1
P53238
PMD1
YER132C
5262 nt
1.6
□□□□□ -2.15
PEF1
P53238
FIG4
YNL325C
2640 nt
1.6
□□□□□ -2.15
PEF1
P53238
KCS1
YDR017C
3153 nt
1.59
□□□□□ -2.15
PEF1
P53238
YDL196W
YDL196W
330 nt
1.59
□□□□□ -2.15
PEF1
P53238
YOR225W
YOR225W
330 nt
1.59
□□□□□ -2.15
PEF1
P53238
REV3
YPL167C
4515 nt
1.59
□□□□□ -2.16
PEF1
P53238
YOR019W
YOR019W
2193 nt
1.58
□□□□□ -2.16
PEF1
P53238
FAB1
YFR019W
6837 nt
1.58
□□□□□ -2.16
PEF1
P53238
YOR345C
YOR345C
351 nt
1.58
□□□□□ -2.16
PEF1
P53238
ALY2
YJL084C
3141 nt
1.58
□□□□□ -2.16
PEF1
P53238
BST1
YFL025C
3090 nt
1.58
□□□□□ -2.16
PEF1
P53238
YDR354C-A
YDR354C-A
144 nt
1.57
□□□□□ -2.16
PEF1
P53238
YNL097C-B
YNL097C-B
123 nt
1.57
□□□□□ -2.16
PEF1
P53238
DNF3
YMR162C
4971 nt
1.57
□□□□□ -2.16
PEF1
P53238
SMC1
YFL008W
3678 nt
1.56
□□□□□ -2.16
PEF1
P53238
YGL007C-A
YGL007C-A
87 nt
1.56
□□□□□ -2.16
PEF1
P53238
KAP122
YGL016W
3246 nt
1.55
□□□□□ -2.16
PEF1
P53238
SAC3
YDR159W
3906 nt
1.55
□□□□□ -2.16
PEF1
P53238
YMR272W-B
YMR272W-B
108 nt
1.55
□□□□□ -2.16
PEF1
P53238
YAR009C
YAR009C
3591 nt
1.54
□□□□□ -2.16
PEF1
P53238
PIK1
YNL267W
3201 nt
1.54
□□□□□ -2.16
PEF1
P53238
CHS1
YNL192W
3396 nt
1.54
□□□□□ -2.16
PEF1
P53238
Q0032
Q0032
291 nt
1.54
□□□□□ -2.16
PEF1
P53238
YJL182C
YJL182C
318 nt
1.54
□□□□□ -2.16
PEF1
P53238
YLR466C-B
YLR466C-B
117 nt
1.54
□□□□□ -2.16
PEF1
P53238
TRM3
YDL112W
4311 nt
1.53
□□□□□ -2.16
PEF1
P53238
STO1
YMR125W
2586 nt
1.53
□□□□□ -2.16
PEF1
P53238
PAN2
YGL094C
3348 nt
1.53
□□□□□ -2.17
PEF1
P53238
SXM1
YDR395W
2835 nt
1.52
□□□□□ -2.17
PEF1
P53238
CFT1
YDR301W
4074 nt
1.52
□□□□□ -2.17
PEF1
P53238
SET3
YKR029C
2256 nt
1.51
□□□□□ -2.17
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Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms