Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 UFD4YKL010C 4452 nt2.32□□□□□ -2.04
RIM8P53179 HSL1YKL101W 4557 nt2.32□□□□□ -2.04
RIM8P53179 HSH155YMR288W 2916 nt2.32□□□□□ -2.04
RIM8P53179 YFR016CYFR016C 3702 nt2.32□□□□□ -2.04
RIM8P53179 YBL005W-BYBL005W-B 5268 nt2.31□□□□□ -2.04
RIM8P53179 ENV11YGR071C 2583 nt2.31□□□□□ -2.04
RIM8P53179 SAP190YKR028W 3102 nt2.31□□□□□ -2.04
RIM8P53179 ZRG8YER033C 3231 nt2.3□□□□□ -2.04
RIM8P53179 YNL144CYNL144C 2223 nt2.3□□□□□ -2.04
RIM8P53179 SBE22YHR103W 2559 nt2.3□□□□□ -2.04
RIM8P53179 YJL052C-AYJL052C-A 120 nt2.3□□□□□ -2.04
RIM8P53179 DGR1YNL130C-A 147 nt2.3□□□□□ -2.04
RIM8P53179 MAD1YGL086W 2250 nt2.3□□□□□ -2.04
RIM8P53179 PRP5YBR237W 2550 nt2.3□□□□□ -2.04
RIM8P53179 GEA1YJR031C 4227 nt2.3□□□□□ -2.04
RIM8P53179 YLL054CYLL054C 2532 nt2.29□□□□□ -2.04
RIM8P53179 CHS6YJL099W 2241 nt2.29□□□□□ -2.04
RIM8P53179 YCR087C-AYCR087C-A 462 nt2.29□□□□□ -2.04
RIM8P53179 AMS1YGL156W 3252 nt2.29□□□□□ -2.04
RIM8P53179 VTC3YPL019C 2508 nt2.28□□□□□ -2.04
RIM8P53179 NOP14YDL148C 2433 nt2.28□□□□□ -2.04
RIM8P53179 STF2YGR008C 255 nt2.28□□□□□ -2.04
RIM8P53179 IFH1YLR223C 3258 nt2.28□□□□□ -2.04
RIM8P53179 DGR2YKL121W 2559 nt2.27□□□□□ -2.05
RIM8P53179 YOR108C-AYOR108C-A 210 nt2.27□□□□□ -2.05
RIM8P53179 SSD1YDR293C 3753 nt2.27□□□□□ -2.05
RIM8P53179 INP53YOR109W 3324 nt2.27□□□□□ -2.05
RIM8P53179 CDC53YDL132W 2448 nt2.27□□□□□ -2.05
RIM8P53179 INP51YIL002C 2841 nt2.26□□□□□ -2.05
RIM8P53179 ZIP1YDR285W 2628 nt2.26□□□□□ -2.05
RIM8P53179 YGR109W-BYGR109W-B 4644 nt2.26□□□□□ -2.05
RIM8P53179 CBF2YGR140W 2871 nt2.25□□□□□ -2.05
RIM8P53179 UTP22YGR090W 3714 nt2.25□□□□□ -2.05
RIM8P53179 BUB1YGR188C 3066 nt2.25□□□□□ -2.05
RIM8P53179 SAS3YBL052C 2496 nt2.25□□□□□ -2.05
RIM8P53179 YJL026C-AYJL026C-A 222 nt2.25□□□□□ -2.05
RIM8P53179 MDS3YGL197W 4464 nt2.25□□□□□ -2.05
RIM8P53179 YHR131W-AYHR131W-A 246 nt2.24□□□□□ -2.05
RIM8P53179 YIL002W-AYIL002W-A 210 nt2.24□□□□□ -2.05
RIM8P53179 YAL067W-AYAL067W-A 228 nt2.24□□□□□ -2.05
RIM8P53179 APL2YKL135C 2181 nt2.23□□□□□ -2.05
RIM8P53179 YCR102W-AYCR102W-A 198 nt2.23□□□□□ -2.05
RIM8P53179 UBP15YMR304W 3693 nt2.23□□□□□ -2.05
RIM8P53179 SEC31YDL195W 3822 nt2.23□□□□□ -2.05
RIM8P53179 MMS22YLR320W 4365 nt2.22□□□□□ -2.05
RIM8P53179 YOR343W-BYOR343W-B 5313 nt2.22□□□□□ -2.05
RIM8P53179 YNL018CYNL018C 1839 nt2.22□□□□□ -2.05
RIM8P53179 YDR521WYDR521W 336 nt2.22□□□□□ -2.05
RIM8P53179 QCR9YGR183C 201 nt2.22□□□□□ -2.05
RIM8P53179 TTI1YKL033W 3117 nt2.22□□□□□ -2.05
RIM8P53179 CSF1YLR087C 8877 nt2.22□□□□□ -2.05
RIM8P53179 PTP2YOR208W 2253 nt2.21□□□□□ -2.06
RIM8P53179 snR81snR81 201 nt2.21□□□□□ -2.06
RIM8P53179 YGL182CYGL182C 324 nt2.21□□□□□ -2.06
RIM8P53179 STB6YKL072W 2301 nt2.21□□□□□ -2.06
RIM8P53179 UBP2YOR124C 3819 nt2.21□□□□□ -2.06
RIM8P53179 ALK1YGL021W 2283 nt2.21□□□□□ -2.06
RIM8P53179 SEC63YOR254C 1992 nt2.21□□□□□ -2.06
RIM8P53179 YPP1YGR198W 2454 nt2.2□□□□□ -2.06
RIM8P53179 BRE1YDL074C 2103 nt2.2□□□□□ -2.06
RIM8P53179 snR39BsnR39B 96 nt2.2□□□□□ -2.06
RIM8P53179 SPP41YDR464W 4308 nt2.2□□□□□ -2.06
RIM8P53179 NAB6YML117W 3405 nt2.19□□□□□ -2.06
RIM8P53179 RPS29AYLR388W 171 nt2.19□□□□□ -2.06
RIM8P53179 TOP2YNL088W 4287 nt2.19□□□□□ -2.06
RIM8P53179 FAR11YNL127W 2862 nt2.19□□□□□ -2.06
RIM8P53179 LHS1YKL073W 2646 nt2.19□□□□□ -2.06
RIM8P53179 UBR1YGR184C 5853 nt2.18□□□□□ -2.06
RIM8P53179 YKR075W-AYKR075W-A 270 nt2.18□□□□□ -2.06
RIM8P53179 CHC1YGL206C 4962 nt2.18□□□□□ -2.06
RIM8P53179 NUP157YER105C 4176 nt2.18□□□□□ -2.06
RIM8P53179 DCP2YNL118C 2913 nt2.17□□□□□ -2.06
RIM8P53179 UBP1YDL122W 2430 nt2.16□□□□□ -2.06
RIM8P53179 TRS130YMR218C 3309 nt2.15□□□□□ -2.07
RIM8P53179 TRA1YHR099W 11235 nt2.15□□□□□ -2.07
RIM8P53179 ISW1YBR245C 3390 nt2.15□□□□□ -2.07
RIM8P53179 SGM1YJR134C 2124 nt2.14□□□□□ -2.07
RIM8P53179 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
RIM8P53179 HMI1YOL095C 2121 nt2.13□□□□□ -2.07
RIM8P53179 NUP100YKL068W 2880 nt2.13□□□□□ -2.07
RIM8P53179 MSH5YDL154W 2706 nt2.12□□□□□ -2.07
RIM8P53179 SEC16YPL085W 6588 nt2.12□□□□□ -2.07
RIM8P53179 RAV1YJR033C 4074 nt2.12□□□□□ -2.07
RIM8P53179 BPH1YCR032W 6504 nt2.12□□□□□ -2.07
RIM8P53179 YBL039C-AYBL039C-A 84 nt2.12□□□□□ -2.07
RIM8P53179 APL1YJR005W 2103 nt2.12□□□□□ -2.07
RIM8P53179 MLH3YPL164C 2148 nt2.12□□□□□ -2.07
RIM8P53179 KRE33YNL132W 3171 nt2.11□□□□□ -2.07
RIM8P53179 PKH2YOL100W 3246 nt2.11□□□□□ -2.07
RIM8P53179 snR62snR62 100 nt2.11□□□□□ -2.07
RIM8P53179 MAK10YEL053C 2202 nt2.11□□□□□ -2.07
RIM8P53179 PSD2YGR170W 3417 nt2.1□□□□□ -2.07
RIM8P53179 PDR8YLR266C 2106 nt2.1□□□□□ -2.07
RIM8P53179 COG4YPR105C 2586 nt2.09□□□□□ -2.07
RIM8P53179 SLX4YLR135W 2247 nt2.09□□□□□ -2.07
RIM8P53179 COG6YNL041C 2520 nt2.09□□□□□ -2.08
RIM8P53179 YLR035C-AYLR035C-A 3468 nt2.08□□□□□ -2.08
RIM8P53179 YLL020CYLL020C 306 nt2.08□□□□□ -2.08
RIM8P53179 YMR175W-AYMR175W-A 195 nt2.08□□□□□ -2.08
RIM8P53179 BFR2YDR299W 1605 nt2.07□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms