Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ESRRAP1-201ENST00000400596 1257 ntBASIC18.76■□□□□ 0.59
SMSP52788 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.76■□□□□ 0.59
SMSP52788 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.76■□□□□ 0.59
SMSP52788 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.76■□□□□ 0.59
SMSP52788 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SMSP52788 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.76■□□□□ 0.59
SMSP52788 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMSP52788 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
SMSP52788 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
SMSP52788 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 DUSP5P2-201ENST00000426873 1033 ntBASIC18.75■□□□□ 0.59
SMSP52788 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.75■□□□□ 0.59
SMSP52788 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.75■□□□□ 0.59
SMSP52788 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SMSP52788 AFG3L1P-217ENST00000557444 2447 ntBASIC18.75■□□□□ 0.59
SMSP52788 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 AL162377.1-201ENST00000618844 1793 ntBASIC18.75■□□□□ 0.59
SMSP52788 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMSP52788 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMSP52788 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SMSP52788 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.74■□□□□ 0.59
SMSP52788 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 AL162412.1-201ENST00000567129 965 ntBASIC18.74■□□□□ 0.59
SMSP52788 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.74■□□□□ 0.59
SMSP52788 AL591742.1-201ENST00000604433 565 ntBASIC18.74■□□□□ 0.59
SMSP52788 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.74■□□□□ 0.59
SMSP52788 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMSP52788 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMSP52788 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.74■□□□□ 0.59
SMSP52788 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMSP52788 AC011484.1-201ENST00000377652 1995 ntBASIC18.73■□□□□ 0.59
SMSP52788 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SMSP52788 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.73■□□□□ 0.59
SMSP52788 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.73■□□□□ 0.59
SMSP52788 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.73■□□□□ 0.59
SMSP52788 AL512408.1-201ENST00000569378 2000 ntBASIC18.73■□□□□ 0.59
SMSP52788 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMSP52788 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.73■□□□□ 0.59
SMSP52788 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.73■□□□□ 0.59
SMSP52788 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMSP52788 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.73■□□□□ 0.59
SMSP52788 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMSP52788 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.73■□□□□ 0.59
SMSP52788 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMSP52788 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMSP52788 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
SMSP52788 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
SMSP52788 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.72■□□□□ 0.59
SMSP52788 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMSP52788 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.72■□□□□ 0.59
SMSP52788 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SMSP52788 RPS2P52-201ENST00000469610 820 ntBASIC18.72■□□□□ 0.59
SMSP52788 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms