Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC073508.3-201ENST00000619697 1419 ntBASIC22.28■■□□□ 1.16
CDK7P50613 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK7P50613 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDK7P50613 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK7P50613 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CDK7P50613 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK7P50613 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
CDK7P50613 CYP2D8P-201ENST00000433633 1490 ntBASIC22.28■■□□□ 1.16
CDK7P50613 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK7P50613 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK7P50613 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.27■■□□□ 1.16
CDK7P50613 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
CDK7P50613 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.27■■□□□ 1.16
CDK7P50613 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.27■■□□□ 1.16
CDK7P50613 KRT8P36-201ENST00000489121 1440 ntBASIC22.27■■□□□ 1.16
CDK7P50613 AP002982.1-201ENST00000492365 877 ntBASIC22.27■■□□□ 1.16
CDK7P50613 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDK7P50613 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.27■■□□□ 1.16
CDK7P50613 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.27■■□□□ 1.16
CDK7P50613 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.27■■□□□ 1.16
CDK7P50613 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.27■■□□□ 1.16
CDK7P50613 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CDK7P50613 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CDK7P50613 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK7P50613 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK7P50613 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK7P50613 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
CDK7P50613 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.26■■□□□ 1.15
CDK7P50613 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.26■■□□□ 1.15
CDK7P50613 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 FITM1-202ENST00000559294 800 ntBASIC22.26■■□□□ 1.15
CDK7P50613 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK7P50613 AC010947.1-201ENST00000623454 693 ntBASIC22.26■■□□□ 1.15
CDK7P50613 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.26■■□□□ 1.15
CDK7P50613 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK7P50613 AC242852.2-201ENST00000615738 1807 ntBASIC22.26■■□□□ 1.15
CDK7P50613 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK7P50613 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.25■■□□□ 1.15
CDK7P50613 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CDK7P50613 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.25■■□□□ 1.15
CDK7P50613 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDK7P50613 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.25■■□□□ 1.15
CDK7P50613 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK7P50613 AC027702.1-201ENST00000563810 1770 ntBASIC22.25■■□□□ 1.15
CDK7P50613 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.24■■□□□ 1.15
CDK7P50613 TERF1P1-201ENST00000311003 1181 ntBASIC22.24■■□□□ 1.15
CDK7P50613 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.24■■□□□ 1.15
CDK7P50613 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.24■■□□□ 1.15
CDK7P50613 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDK7P50613 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.24■■□□□ 1.15
CDK7P50613 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CDK7P50613 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.24■■□□□ 1.15
CDK7P50613 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.24■■□□□ 1.15
CDK7P50613 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.24■■□□□ 1.15
CDK7P50613 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDK7P50613 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDK7P50613 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.24■■□□□ 1.15
CDK7P50613 KRT18P22-201ENST00000402024 1347 ntBASIC22.24■■□□□ 1.15
CDK7P50613 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDK7P50613 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDK7P50613 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDK7P50613 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.24■■□□□ 1.15
CDK7P50613 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.23■■□□□ 1.15
CDK7P50613 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.23■■□□□ 1.15
CDK7P50613 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 KRT18P57-201ENST00000443599 1254 ntBASIC22.23■■□□□ 1.15
CDK7P50613 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.23■■□□□ 1.15
CDK7P50613 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.23■■□□□ 1.15
CDK7P50613 NAPSB-206ENST00000562112 1266 ntBASIC22.23■■□□□ 1.15
CDK7P50613 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.23■■□□□ 1.15
CDK7P50613 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CDK7P50613 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.23■■□□□ 1.15
CDK7P50613 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK7P50613 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms